Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 108 a.a., ribosome-associated translation inhibitor RaiA from Castellaniella sp019104865 MT123

 Score = 48.5 bits (114), Expect = 2e-11
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)

Query: 1  MKINITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRG 60
          M + ITG+++E+T AIR ++  K  ++ +    +I  Q   S EP K    E  + +   
Sbjct: 1  MSLTITGRHLEITPAIREYVHTKTARILRHFDQVIDTQVLLSIEPLKHTA-EITMRLRGK 59

Query: 61 QLVASAIHEDLYAAINEVEQKLERQLNKLRHKPE 94
           L   A  ++LYAAI+ +  K++RQ+ K + K +
Sbjct: 60 DLHCEASDDNLYAAIDLLVDKVDRQVIKYKSKAQ 93