Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 118 a.a., SSU ribosomal protein S30P / sigma 54 modulation protein (RefSeq) from Shewanella sp. ANA-3

 Score = 85.1 bits (209), Expect = 2e-22
 Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 3  INITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRGQL 62
          + IT K +EVT+ IR  IE +  KL +  V +I      +EE     K EA V IP G+L
Sbjct: 2  LKITSKQLEVTAPIRERIESRFDKLSRHDVQLINPHVIITEE-KPGFKIEASVGIPNGEL 60

Query: 63 VASAIHEDLYAAINEVEQKLERQLNKLRHKPEARR 97
           A A H++LYAAI  + QKLE+QLN+L HKPEA+R
Sbjct: 61 FAQAKHDNLYAAITAMGQKLEKQLNRLTHKPEAQR 95