Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 95 a.a., sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) from Shewanella sp. ANA-3

 Score = 58.2 bits (139), Expect = 3e-14
 Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 1  MKINITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRG 60
          M+IN++G +IE+T ++R ++E K  KLE+    I       + E   Q+  EA +++  G
Sbjct: 1  MQINLSGHHIEITESLRAYVEEKFSKLERHFEQINNVHVVLNVE-KMQQIAEARINLTGG 59

Query: 61 QLVASAIHEDLYAAINEVEQKLERQLNKLRHK 92
          ++ A++ H D+YAAI+ +  KL+RQ+ K + K
Sbjct: 60 EVFATSEHADMYAAIDVLIDKLDRQVIKHKEK 91