Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 27/330 (8%)

Query: 32  SALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLDN 91
           +A  +++Y W D I  + +  + K TG+      FD+++     +L   +  +D++V  N
Sbjct: 25  AASTVHIYNWSDYIGETTLADFEKATGIKPVYDVFDSNETLEGKLLAG-RTGYDVVVPSN 83

Query: 92  VSAFIFSRQNVFE--DLTALPNRANNDPMWLQAC------GTHAVPYFWGSVGIAYRKSL 143
                  +   F+  D   LPN AN DP+ L+          +AVPY WG+ GI Y    
Sbjct: 84  HFLGKQIKAGAFQKLDKAQLPNYANLDPVLLKRLEKNDPGNQYAVPYLWGTNGIGYNVEK 143

Query: 144 F------DKPPTQWS---EVVDIAPAHRGRVGMLKDSVETLLPA-LYMLNASPITDSIDT 193
                  DK  + W+   E  +I       V  L DS + ++PA L  L  +P ++  + 
Sbjct: 144 IKAVLGVDKIDS-WAMLFEPENIKKLSNCGVSFL-DSGDEMIPAMLNYLGLNPNSEDPED 201

Query: 194 LRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQ----DW 249
            ++A   L    P++ TY     Y+ S      + +A  +SGD +      +      + 
Sbjct: 202 YKKAEAQLLKIRPYV-TYFNSSKYI-SDLANGEICVAAGFSGDIFQARERASEAGKGVEI 259

Query: 250 DFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARAL 309
            + +P+    LW D +A+   + N  QA AF+++++KP++ A  ++ +  A+PN KA  L
Sbjct: 260 AYVIPKEGGNLWFDMLAIPRDATNVKQAHAFINYVLKPEVIAQVSDTVGYANPNPKAGEL 319

Query: 310 LPVEHREDLSIYLPEQRLAEGIIDSELSAK 339
           +  + R D ++Y P+  + +  ++SEL  K
Sbjct: 320 MDQKVRTDEAVYPPQAVVDKLYVNSELPPK 349