Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 31/361 (8%)

Query: 14  MIKRFLSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERS 73
           M+K    L+++ +    A  +   +Y W   IAP  ++ +  +TG       +D+++   
Sbjct: 1   MLKSIFPLLLIVSTAQAADTVR--IYNWSSYIAPDTLQNFTTQTGHQTQYDLYDSNEVLD 58

Query: 74  LLMLKSVQLPFDIMVLDNVSAFIFSRQNVFE-----DLTALPNRANNDPMWLQAC----- 123
             ++      +D++   N      +RQ         D + LPN  N +P  ++       
Sbjct: 59  AKLMAG-HSGYDVVFPSN---HFMARQITAGALKPLDRSKLPNWHNLNPTLMKVLEANDP 114

Query: 124 -GTHAVPYFWGSVGIAYRKS-----LFDKPPTQWSEVV---DIAPAHRGRVGMLKDSVET 174
              +  PY WGS GI Y  +     L D P   W  V    ++    R  V ML +  E 
Sbjct: 115 GNRYGFPYLWGSTGIGYNVAKVKAVLGDVPIDSWDIVFKPENMKKLARCGVAMLDNGPEI 174

Query: 175 LLPALYMLNASPITDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYS 234
           L  AL  L     +       +A  LL    P++ +Y +   Y  S   T ++ + V +S
Sbjct: 175 LPIALNYLGLPHHSKDKADYEKAQALLLKVRPYV-SYFHNSKYT-SDLATGDVCLVVGFS 232

Query: 235 GDHYSL----NRFFNTQDWDFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIA 290
           GD        N   N Q   +++P+    +W D +A+ + +PN      FL++L+ P + 
Sbjct: 233 GDVMQAAARANEAGNGQQIAYAIPKEGSPMWFDMVAMPADAPNEGAGYEFLNYLLDPKVM 292

Query: 291 AINAEYIRAASPNYKARALLPVEHREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKIISS 350
           A  + ++  A+ N  A  L+    R D  +Y P+  + +  +   +  +N  LR ++ S 
Sbjct: 293 AGISNHVHYANGNTAAEGLVDKAIRNDPMVYPPDSVMKKLFVLEAMPLENDRLRTRVWSR 352

Query: 351 V 351
           +
Sbjct: 353 I 353