Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., Probable periplasmic spermidine/putrescine-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 77/357 (21%), Positives = 157/357 (43%), Gaps = 26/357 (7%)

Query: 18  FLSLMVLNTVCYQASALELNVYL--WEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLL 75
           F + ++   +    +A+E  +YL  W   +AP   + + ++TG  V++  FD+ +     
Sbjct: 10  FSASLLCAGISTSVAAVEPGMYLYNWFGLLAPETPKEFEQETGTRVHMDAFDSAEIMQSK 69

Query: 76  MLKSVQLPFDIMVLDNVSAFIFSRQNVFE--DLTALPNRANNDPMWLQACGT------HA 127
           ++   +  +D++V  +       R  V +  D + L N ++ DP  L           +A
Sbjct: 70  VMAG-RTGYDVVVATSNVLPSLIRAGVLQPLDRSQLSNFSHIDPDLLSQLAVNDPGNRYA 128

Query: 128 VPYFWGSVGIAY-----RKSLFDKPPTQWSEVV----DIAPAHRGRVGMLKDSVETLLPA 178
           VPY WG+ GI Y     R +L D  P    +++    +I+      V ML    E +  A
Sbjct: 129 VPYLWGTTGIGYDVDKVRGALGDNAPVNSWDLIFKEENISKLQSCGVAMLDSPSEIISIA 188

Query: 179 LYMLNASPITDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHY 238
           L  L     + + D  ++A  LL    P++L ++   S + +     N+   V ++    
Sbjct: 189 LNYLGLPSNSKNPDDYQKAQALLLKIRPYVLYFDS--SKIDADLADGNICAVVGWANGAL 246

Query: 239 S---LNRFFNT-QDWDFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINA 294
           +   +N   NT +   +S+P      W + + +   +P+  +  AF++++M+P++ A  +
Sbjct: 247 AAQAINEKANTGRKIAYSLPREGALSWSENLVLLKDAPHPKEGMAFINYMMRPEVIAKTS 306

Query: 295 EYIRAASPNYKARALLPVEHREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKIISSV 351
            +    + N  A   +  + R++  IY  ++ +A  I    L  K   +R +I + V
Sbjct: 307 NHTLYPNANKDAAEFVERKLRDNPWIYPDKKTIATLIPLEPLPLKLERIRTRIWTKV 363