Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 27/313 (8%)

Query: 36  LNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMV--LDNVS 93
           + +Y W + + P +++++ ++TG+      FD+ +     +L      +D++     NVS
Sbjct: 29  VRIYNWIEYLPPEILKSFEEETGIRPIYDVFDSVETLESKLLTG-NSGYDVVYPSSSNVS 87

Query: 94  AFIFSRQNVFEDLTALPNRANNDPMW---LQACGT----HAVPYFWGSVGIAYRKSLF-- 144
             I +      D + LPN  + DP +   L+A G     +A PY WG+  I Y       
Sbjct: 88  HLIAAGAVQPLDRSQLPNWQHLDPEFMKTLEAIGDEGNRYAAPYLWGTTLIGYNVDKVRQ 147

Query: 145 ----DKPPTQWSEVV---DIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDTLRQA 197
               D     W  +    ++A      VG L  + E +  AL+     P +   +   QA
Sbjct: 148 VLGADVQMNTWDIIFKEENMAKLASCGVGFLDAANEIVPIALHYKGLDPNSQKREDYPQA 207

Query: 198 YRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDWDFSVP--- 254
              +    P+I TY +  S          + + V +SG      R  +       V    
Sbjct: 208 QAAMHTVRPYI-TY-FNSSRYGMDLANGEICVGVGWSGGVALATRLADAAGKGVKVAMAL 265

Query: 255 --EGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPV 312
             EG P +W D M V + +P+T +A AF++++++PD+ A  +  I   +PN  A AL+  
Sbjct: 266 PKEGAP-MWADVMMVPTNAPHTAEAYAFINYILRPDVIARISNKIGYPNPNKDATALVDA 324

Query: 313 EHREDLSIYLPEQ 325
           E R + ++Y+P++
Sbjct: 325 EIRSNPAMYIPDE 337