Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 89/328 (27%), Positives = 139/328 (42%), Gaps = 28/328 (8%)

Query: 19  LSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDD--ERSLLM 76
           LSLM +     QA    L+VY W D IAP  +  + K++G+ V    FD+++  E  LL 
Sbjct: 11  LSLMGVVATAAQADDKVLHVYNWSDYIAPDTIAKFEKESGIKVVYDVFDSNETLEAKLLA 70

Query: 77  LKSVQLPFDIMVLDNVSAFIFSRQNVFEDL--TALPNRANNDPMWLQACGT------HAV 128
            KS    +D++V  N       +  V+++L  + LPN  N +   L+A         +A 
Sbjct: 71  GKS---GYDVVVPSNNFLAKQIKAGVYQELDKSKLPNWKNLNESLLKAVSVSDPDNKYAF 127

Query: 129 PYFWGSVGIAYRKSLF------DKPPTQWS---EVVDIAPAHRGRVGMLKDSVETLLPAL 179
           PY WGS+GI             D P   W    +  + A      +  L    E L  AL
Sbjct: 128 PYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKLKSCGISFLDSPTEMLPIAL 187

Query: 180 YMLNASPITDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYS 239
           + L+    +     L +A  L     P I  Y +   Y+ S     N+ +AV YSGD Y 
Sbjct: 188 HYLDYPTDSQDKKQLAKAEELFMTIRPSI-GYFHSSKYI-SDLANGNICVAVGYSGDIYQ 245

Query: 240 LN----RFFNTQDWDFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAE 295
                          +++P+     + D +A+   + N   A  F++FLM+P++ A    
Sbjct: 246 AKSRAAEAGGKVKVAYNIPKKGAGSFYDMVAIPKDAQNVEGAYKFMNFLMRPEVMAEITN 305

Query: 296 YIRAASPNYKARALLPVEHREDLSIYLP 323
            +R  + N  A AL+  E   D  +Y P
Sbjct: 306 AVRFPNGNAAATALVDKEITSDPGVYPP 333