Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 25/320 (7%)

Query: 23  VLNTVCYQASAL--ELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSV 80
           + N+  Y A  L  ++++  W +   P+  EA+   TGV+V +  F +++E  L  L++ 
Sbjct: 52  LFNSAAYAAGDLGTQMSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEM-LAKLQAG 110

Query: 81  QLPFDIMVLDNVSAFIFSRQNVFE--DLTALPN--------RANNDPMWLQACGTHAVPY 130
            + +D+ V  N +   + +  + +  DL+ LPN        R  N+   +    T+AVP 
Sbjct: 111 GIGWDLFVPTNYTISTYVKLGLIDELDLSKLPNYDASTENARFTNEG--IVEGKTYAVPK 168

Query: 131 FWGSVGIAYRKSLFDKPPTQWSEVVDIAPAHRGRVGMLKD-SVETLLPALYMLNASPITD 189
            WG+ GIA        P   W +  +IA        M+ D  + T+  AL  L  S  + 
Sbjct: 169 NWGTTGIAVNSDKIKAPVASWKDFFEIAMTEADGRAMVHDYQLTTIGNALVSLGFSFNSI 228

Query: 190 SIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDW 249
             + L +A  LL    PH+  Y     Y  S   TD   M + ++ D   LNR  +  + 
Sbjct: 229 KPEELAKAEELLIKVKPHL--YAINSDYQPSMRATD-AWMTMCWTNDGAQLNR--DMPEI 283

Query: 250 DFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARA- 308
            F + +    +W D  A+   + N     A LD+LM P  A    E+I   +P   +R  
Sbjct: 284 KFVLGKDGGEIWSDFYAIPKSAANKPAGYALLDYLMTPANAV--KEHIANGAPTTDSRVM 341

Query: 309 -LLPVEHREDLSIYLPEQRL 327
            LLP +   +  +Y  E  L
Sbjct: 342 KLLPADVTSNKIVYPDEAAL 361