Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., putrescine-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 93/335 (27%), Positives = 161/335 (48%), Gaps = 31/335 (9%)

Query: 12  SQMIKRFLSLMVL--NTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDND 69
           S++I   L+  VL  +T+   A    +NVY W D I  S++E + K+TG+ V    FD++
Sbjct: 2   SKLIVATLTTAVLAGSTILAFAQERVVNVYNWSDYIDDSILEEFTKETGIKVVYDVFDSN 61

Query: 70  DERSLLMLKSVQLPFDIMVLDNVSAFIFSRQ---NVFE--DLTALPNRANNDPMWLQACG 124
           +     +L      +D++V    +A+   RQ    VF+  D + LPN +N   M ++   
Sbjct: 62  EILETKLLAGGS-GYDVVV---PTAYFLQRQIAAGVFQKLDKSKLPNISNMWDMVMERTA 117

Query: 125 TH------AVPYFWGSVGIAY-----RKSLFDKPPTQWSEVVD--IAPAHRGRVGMLKDS 171
            +      AV Y WG+ GI Y     ++ L       W  + D  IA   +     L DS
Sbjct: 118 QYDPGNEYAVDYMWGTTGIGYNVEKMKEILGTDEKPNWDVIFDPEIAAKFKDCGIHLLDS 177

Query: 172 VETLLP-ALYMLNASPITDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMA 230
              ++P AL  L  +P +     L +A  LL    P+I  + +   Y+ +    D + +A
Sbjct: 178 PTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKF-HSSEYINALANGD-ICLA 235

Query: 231 VSYSGDHYSL-NRFFNTQDW---DFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMK 286
           V +SGD +   +R    +     D+S+PE    +W D +A+ + +P+  +A  F++++MK
Sbjct: 236 VGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEFINYMMK 295

Query: 287 PDIAAINAEYIRAASPNYKARALLPVEHREDLSIY 321
           P++ A  + Y+  A+ N  ++  L  E  ED +IY
Sbjct: 296 PEVIAKASNYVFYANGNKASQQFLDKEVLEDTAIY 330