Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., putrescine-binding periplasmic protein PotF from Phaeobacter inhibens DSM 17395

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 36/324 (11%)

Query: 31  ASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKS-----VQLPFD 85
           A A E+ VY W D I   ++E +  +TG+ +    FD+++     ML       V +P  
Sbjct: 19  AVAEEVRVYNWSDYIDEDLLEKFETETGIDLIYDVFDSNELLETKMLAGGSGYDVVVPTG 78

Query: 86  IMVLDNVSAFIFSRQNVFEDLTALPNRANNDPMW---------LQACGTHAVPYFWGSVG 136
             +   + A  F +     D + L N  N   MW               ++V Y WG+ G
Sbjct: 79  SFLARQIQAGAFQKL----DTSKLSNAGN---MWDVIEDRTARYDPDNLYSVNYMWGTTG 131

Query: 137 IA-----YRKSLFDKPPTQWSEVV----DIAPAHRGRVGMLKDSVETLLPALYMLNASPI 187
           I        ++L    P    E+V    +I       V  L    E +  AL  +   P 
Sbjct: 132 IGANTAKVEEALGADAPIDSLELVFNPDNIEKLANCGVYFLDAPDEMIPAALKYIGEDPN 191

Query: 188 TDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSL----NRF 243
           +   D + +A  +L A  P++  + +   Y+ +    D + +A  +SGD        +  
Sbjct: 192 SMDPDVVAKAEPVLMAIRPYVKKF-HSSEYINALANGD-ICVAFGWSGDILQARDRADEA 249

Query: 244 FNTQDWDFSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPN 303
            N  +  F+ P+    +W D MA+   +PN   A  FL+F+M+ +  A  + Y+  A+ N
Sbjct: 250 DNGVEIVFNAPKEGALMWFDQMAIPVDAPNPDGAHKFLNFIMEAENMAAASNYVYYANGN 309

Query: 304 YKARALLPVEHREDLSIYLPEQRL 327
             ++  L  +   D +IY  E+ L
Sbjct: 310 KASQEFLEEDVIGDPAIYPSEETL 333