Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 69/311 (22%), Positives = 127/311 (40%), Gaps = 31/311 (9%)

Query: 36  LNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLDNVSAF 95
           L  Y W + + P ++E + K+TG+ V    +++++     +       +D++V       
Sbjct: 29  LYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYFVD 88

Query: 96  IFSRQNVFE--DLTALPNRANNDPMWLQAC----GTHAVPYFWGSVGIAYRKSLFD-KPP 148
              ++ + +  D + L N  N DP  L         +++PY WG+  I       D K  
Sbjct: 89  KMRKEGMLQKIDKSKLSNFGNLDPEMLNKPFDPNNDYSIPYIWGATAIGINSDEIDPKTV 148

Query: 149 TQWSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDTLRQAYRLLDAANPHI 208
           T W+++    P ++  + +  D+ E    AL  L  S  T     +  AY  L    P++
Sbjct: 149 TSWADLWK--PEYKSSLLLTDDAREVFQVALRKLGYSGNTTDPKEIEAAYNELKKLMPNV 206

Query: 209 LTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDW---------DFSVPEGRPY 259
             +            +DN   A  Y     +L   +N   W         +   P+    
Sbjct: 207 AAFN-----------SDN--PANPYMEGEVNLGMVWNGSAWVARQAGTPLEVVWPKEGGI 253

Query: 260 LWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPVEHREDLS 319
            W+D +++ + + N   A   ++FL++P+IA   AE I   +PN  AR +L  E   D S
Sbjct: 254 FWMDSLSIPANAKNVDGALKLINFLLRPEIAKQVAETIGYPTPNLAARKMLSPEVANDKS 313

Query: 320 IYLPEQRLAEG 330
           +Y     + +G
Sbjct: 314 LYPDAATIQKG 324