Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., spermidine/putrescine-binding protein from Caulobacter crescentus NA1000

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 80/327 (24%), Positives = 146/327 (44%), Gaps = 12/327 (3%)

Query: 31  ASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLD 90
           A   +LN Y W+  I  + +  + K TG+ VN+  F  +DE     LK+    FD++V  
Sbjct: 45  AEEAKLNFYNWDTYIGETTLGDFKKATGIDVNMSLFATNDEL-FAKLKAGNPGFDVVVPS 103

Query: 91  NVSAFIFSRQNVFEDL--TALPNRANNDPMWLQA----CGTHAVPYFWGSVGIAYRKSLF 144
           N      S+  + E L    +PN  N DP +L          ++PY W  +GI YRKS  
Sbjct: 104 NEFVTRMSQGGLLEPLDHAKIPNMKNIDPSFLNPEFDPGRKFSMPYTWLLLGIGYRKSKV 163

Query: 145 DKPPTQWSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDTLRQAYRLLDAA 204
              P  W  + D +  ++GR+ +L +S + +  +   L  S      D L +  ++L   
Sbjct: 164 KGVPDSWKWLFD-SDQYKGRIALLSESADLVRLSAKYLGHSVNNIPQDMLPKIEQMLIKQ 222

Query: 205 NPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDWDFSVPEGRPYLWVDC 264
            P +  +       +    +  + + + Y+GD     +     D DF VP+    +  D 
Sbjct: 223 KPFVKAFHD--DNGQDMLMSGEVDLVLEYNGDIAQAMK--EDPDLDFVVPKEGSLINSDT 278

Query: 265 MAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPVEHREDLSIYLPE 324
           + +   +P    A AF+++L+     A  ++ I   +PN  A+AL+P +++ +  I+ P 
Sbjct: 279 LCIPKGAPRPNNAHAFINYLLDAQAGAEISKTILYPTPNAAAKALMPEDYKNNPVIFPPA 338

Query: 325 QRLAEGIIDSELSAKNLSLRAKIISSV 351
             +A+    +   A+  S   ++I+ V
Sbjct: 339 DVMAKCEYGAFEGAEKASQYEELITRV 365