Pairwise Alignments

Query, 791 a.a., biofilm architecture maintenance protein MbaA from Vibrio cholerae E7946 ATCC 55056

Subject, 1003 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  242 bits (617), Expect = 8e-68
 Identities = 147/444 (33%), Positives = 238/444 (53%), Gaps = 21/444 (4%)

Query: 327 ELHSTYQRTKALAENDHLTKLANR--YQFQVQADLLLSRCYDTQHIWVMYIDLDNFKYVN 384
           E   T +R + + ++D LT L NR   + +++  +L ++ Y+ + + V+++DLD FK VN
Sbjct: 534 ERQLTEKRIRFMGDHDALTGLPNRTLLEDRLKQAMLYAQRYN-RLVTVVFLDLDKFKLVN 592

Query: 385 DKYGHQIGDSLLVSFATHVRQLCKNFEASHNTYSIAARLSGDEFAILLVS-PKRFNDCAK 443
           D  GH  GD LL + A  +    +  +          RL GDEF I+L   P   +    
Sbjct: 593 DSLGHSAGDELLKTVAQRMLGCVRRTDT-------VVRLGGDEFVIILFDQPSDLDGVTP 645

Query: 444 IF---AQRLLAPIQNKDNSPLSHFPITASIGIATFPKDGEHIEKLLLNADTAMYQAKNAG 500
           +     + +L PIQ   ++      +T S+G+AT+P DG   + LL NAD AMY+AK  G
Sbjct: 646 VLHKIQEAILRPIQLSGHT----LHVTCSMGLATYPTDGTDTDTLLSNADAAMYRAKELG 701

Query: 501 KNQVAYYSQALDQIVQRRNNIERALRLGLFDQEFNLAYQPYFTCSGKRLVGFEVLLRWQS 560
           +N   +Y+  ++  VQ +  ++  LR  L + EF L YQP       +++G E L+RWQ 
Sbjct: 702 RNSFQFYTSEMNNKVQGKLAMQDGLRSALNNDEFLLLYQPQVDLQSGQIIGVEALIRWQH 761

Query: 561 ELLGEVSPEEFIPIAEQTGLFGTIDRWVISKAFQEISTLQAIVKEPIQVSINLSSAELNS 620
             LG VSP +FIP AE+TGL   I  WVI  A ++    Q     PI +S+N+S+ +   
Sbjct: 762 PELGMVSPIKFIPQAEETGLIVPIGDWVIHSACRQNKAWQDAGWPPITMSVNISARQFIE 821

Query: 621 LKLAQFIHRQAEQFGVSPAWIDFEITETFAAD--SQSFPLLHELSRLGYGLTIDDFGSGY 678
             L   +    ++ G+ P +++ E+TE+       Q+   +  L  +G  L+IDDFG+GY
Sbjct: 822 RDLIDRVMHALQESGLDPMYLELELTESLIMQDLQQAISKMKALQAMGISLSIDDFGTGY 881

Query: 679 TSITQLVQYPVQKIKFDRHFL-DTLIATNKQNVIRPLIDLCHSQSMKVTAEGIESETMHQ 737
           +S+  L  +P+ ++K D+ F+ D     N + +   +I L H  ++KV AEG+E+E    
Sbjct: 882 SSLAALKSFPIARLKIDQSFVRDLPDNENDKAIATAVISLGHKLNLKVIAEGVETEEQQT 941

Query: 738 WLADYECDYMQGFYFGYPMSLSEI 761
           +L D  CD +QG++F   +S  EI
Sbjct: 942 FLRDNGCDEIQGYFFSKAVSAQEI 965



 Score = 26.9 bits (58), Expect = 0.006
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 247 KLINAQLHSIQRELLLSFGVSALVTVLMLLLLLYRHVINPILHLDKQLEEVENNQRKNIE 306
           +L+ A   S QR +L+  G S +    +  + + RHV+  +  + +QL +   ++   + 
Sbjct: 265 RLVEASNRS-QRWVLIMLGASLVFAWFVTRVFMGRHVLVRLNEISRQLRQEHTDKTHLMM 323

Query: 307 KLNTDDEIGRLS 318
             +  DEIG ++
Sbjct: 324 ADHGKDEIGNMA 335