Pairwise Alignments

Query, 791 a.a., biofilm architecture maintenance protein MbaA from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  229 bits (584), Expect = 3e-64
 Identities = 139/452 (30%), Positives = 248/452 (54%), Gaps = 15/452 (3%)

Query: 316 RLSSRFYAMYSELHSTYQRTKALAENDHLTKLANRYQFQVQADLLLSRCYDTQHIW-VMY 374
           R + +  +M   L +++++ K LAE+D LTKL NRY F++  +  ++R   +  +  V+ 
Sbjct: 119 RYAKQRASMALALRNSHEKLKELAEHDSLTKLMNRYGFELCLNRAIARVKRSNDLLAVIL 178

Query: 375 IDLDNFKYVNDKYGHQIGDSLLVSFATHVRQLCKNFEASHNTYSIAARLSGDEFAILLVS 434
           +DLD+FK +ND  GHQ GD LLV  A+ +  + ++ +       + ARL GDEF ++LV+
Sbjct: 179 LDLDDFKAINDTLGHQTGDILLVKVASRLSTVLRDGD-------VIARLGGDEF-VVLVT 230

Query: 435 PKRFNDCAKIFAQRLLAPIQNKDNSPLSHFPITASIGIATFPKDGEHIEKLLLNADTAMY 494
              +     I A RLL   +       +   I ASIG+A + +      +L+  AD AMY
Sbjct: 231 DNDYKYFPMIVANRLLKAFEEVFCLGDNDVMIGASIGVAFYNEAASDSSELMKCADIAMY 290

Query: 495 QAKNAGKNQVAYYSQALDQIVQRRNNIERALRLGLFDQEFNLAYQPYFTCSGKRLVGFEV 554
           +AK  G+NQ+ +YS+ALD+ V+ RN+IE +LR+ L   +F + YQ        ++VG E 
Sbjct: 291 RAKKMGRNQIQFYSEALDKEVRYRNHIESSLRIALRLNQFKVYYQVQVDAQTHQMVGMEA 350

Query: 555 LLRWQSELLGEVSPEEFIPIAEQTGLFGTIDRWVISKAFQEIS---TLQAIVKEPIQVSI 611
           L+RW     G +SP++F+PIAE+ GL   I  WV+ +  ++        A       +++
Sbjct: 351 LIRWLHPEDGLISPDQFLPIAEEIGLMEEIGDWVLFETCRQAQYWLNQLAPTGHSFTIAV 410

Query: 612 NLSSAELNSLKLAQFIHRQAEQFGVSPAWIDFEITETFAADS--QSFPLLHELSRLGYGL 669
           NLS++++  + L + I    +  G++P  ++ EITE    +   +   +L ++++LG   
Sbjct: 411 NLSASQIGHVDLYEKIAHVLKVTGLTPGALELEITENCLIEEPHEHAKILDKIAQLGVRF 470

Query: 670 TIDDFGSGYTSITQLVQYPVQKIKFDRHFLDTLIATNKQ-NVIRPLIDLCHSQSMKVTAE 728
            +DDFG+G++S+  +  +P+  +K D+ F+ +     K   ++  L++  +  ++   AE
Sbjct: 471 ALDDFGTGFSSLEHIKLFPISVLKIDKSFIASYDKDEKDTRLLSALLNFAYGFNVTSVAE 530

Query: 729 GIESETMHQWLADYECDYMQGFYFGYPMSLSE 760
           GIE+    ++     C+ +QG+ F  P+  SE
Sbjct: 531 GIETLEQAEFCTVRHCNLLQGYLFSRPLEASE 562