Pairwise Alignments

Query, 791 a.a., biofilm architecture maintenance protein MbaA from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  238 bits (607), Expect = 1e-66
 Identities = 144/436 (33%), Positives = 236/436 (54%), Gaps = 20/436 (4%)

Query: 339  AENDHLTKLANRYQF--QVQADLLLSRCYDTQHIWVMYIDLDNFKYVNDKYGHQIGDSLL 396
            A  D LT L NR  F  ++Q ++ L++ +D++ + ++ IDLD FKY+ND  GH  GD LL
Sbjct: 633  AHFDTLTGLPNRKLFNERLQHEIQLAQ-HDSRKLAILLIDLDQFKYINDVQGHATGDLLL 691

Query: 397  VSFATHVRQLCKNFEASHNTYSIAARLSGDEFAILLVSPKRFNDCA-KIFAQRLLAPIQN 455
                   + + K  E       + AR+ GDEF ++L  P+  N+ A +  A R++  +  
Sbjct: 692  -------QDVAKRLENIAGKNDLIARIGGDEFVLIL--PRVTNEFAIEHMASRIIETLST 742

Query: 456  KDNSPLSHFPITASIGIATFPKDGEHIEKLLLNADTAMYQAKNAGKNQVAYYSQALDQIV 515
              N       I+AS GI  +P+DG  +  L  N + AMYQAK+AG+N   Y++  ++Q +
Sbjct: 743  PFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAM 802

Query: 516  QRRNNIERALRLGLFDQEFNLAYQPYFTCSGKRLVGFEVLLRWQSELLGEVSPEEFIPIA 575
              R  +E+ LR  +   EF L YQP       ++   E L+RWQ   LG + P++FI IA
Sbjct: 803  FARMELEQRLRRAVAQDEFTLHYQPIVEMKTGKVCSVEALIRWQDPDLGLIPPDQFIGIA 862

Query: 576  EQTGLFGTIDRWVISKAFQEISTLQAIVKEPIQVSINLSSAE---LNSLKLAQFIHRQAE 632
            E+TGL   +  WV+++A  ++   Q +  + + V+IN+SS +      +   Q +     
Sbjct: 863  EETGLIEPMGEWVLNQAMHDLRQWQQLGLQ-LNVAINVSSRQCVNARGMGFDQVLQECFN 921

Query: 633  QFGVSPAWIDFEITETFAADSQSFPL--LHELSRLGYGLTIDDFGSGYTSITQLVQYPVQ 690
            +  ++P  +  EITE+      S  L  L  + RLG  + IDDFG+GY+S++ L ++P+ 
Sbjct: 922  RHHINPRNVHIEITESMLMGDASHCLSTLEAIRRLGSQIYIDDFGTGYSSLSYLKKFPIS 981

Query: 691  KIKFDRHFLDTLIATNKQ-NVIRPLIDLCHSQSMKVTAEGIESETMHQWLADYECDYMQG 749
             IK DR F++  ++ N   N+++ ++ +  S  M++ AEGIE+E     L D  C Y QG
Sbjct: 982  VIKIDRSFVENALSNNSNTNLVKAIVMMGQSLEMELVAEGIETEAQWNLLRDLGCHYAQG 1041

Query: 750  FYFGYPMSLSEISPWL 765
            +    P+  + I+P L
Sbjct: 1042 YLISKPLPFAAITPLL 1057