Pairwise Alignments

Query, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) from Pseudomonas stutzeri RCH2

 Score =  294 bits (753), Expect = 7e-84
 Identities = 191/637 (29%), Positives = 306/637 (48%), Gaps = 7/637 (1%)

Query: 10  RSLVSILMFTTVWAVGSASASTLDLEAQRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLT 69
           R  +S L F    +     AS   L  QR  YD+A++ L + +   Y+R +  +  YPL 
Sbjct: 2   RGRLSSLCFCLFVSAIGLDASAASLSQQRQYYDEAKQALAKGDSGPYRRYQSALRDYPLE 61

Query: 70  PYLDYRAFLIDLGSKPPIAVRNFIDSHKEYPFSARIAAPYLDALARSKKWSALLQFQTQL 129
           PYL Y      L S     V  F+  H + P  + +   +L  LA    W    ++    
Sbjct: 62  PYLAYDELTHRLKSASNQEVEKFLAEHGDLPQISWMKLRWLRLLAARGDWQTFTRYYDPK 121

Query: 130 PNGETYQCHYYNAKLQTGKRNEAFEGAKKLWLNGASIADACDPLFAEWDRVGGLSDDWVL 189
            N     C +   +L+ G    A    ++LWL G S  ++CDPLF  W+  G L++D   
Sbjct: 122 MNFTELDCLFAQYQLRNGLPG-ADAATERLWLVGKSQHNSCDPLFELWESKGLLTEDRRW 180

Query: 190 KRALLAFEGRNRNLIVYLQKKLDGKKSQAKAQGMLELFDKPERVLAYSRKASQDPINQKL 249
           KR  LA E  N  +  +L K+L   +SQ   Q M+++  KP+ +    R +   P    +
Sbjct: 181 KRTKLAVESGNYGVASFLVKRLPTLQSQG--QLMIDVAQKPQMLRQAERFSPTSPAMADV 238

Query: 250 AELALQKWARSEPQEAQAVFNDVAKAQGWNQEQKGRVARFIAIRLMDTEEAAIAKWRDEV 309
             + L++ AR +P++A ++ +  A+   ++ E+K  +AR I + L    +A   K   E 
Sbjct: 239 VSIGLRRLARQDPEQALSLLDGYARRFAFSPEEKVAIARQIGLTLAKRFDARALKVMAEY 298

Query: 310 TRTSQDVRLIEARIRLALRENDWRGLSQWIAVLPEQERKTLRWQYWQGRS-EIALGKKKE 368
               +D  + E R RL LR+  W    Q     P++   T RW+YWQ RS ++A  + K+
Sbjct: 299 DPELRDNTVTEWRTRLLLRQGQWNEAYQLTQRFPDELANTNRWRYWQARSLQLAKPESKQ 358

Query: 369 GTERLKALLGQRSFYSVAAAKILQQSVNYPTSTVTLDMKQIKAHKKA--LARIDELIALD 426
                + +  +R FY   +A  +Q         + LD K ++  +    + R  E     
Sbjct: 359 AALLYQPVAEERDFYGFLSADRIQAPYKLNHQPLALDPKVVQKVRNTAGIRRALEFHDRG 418

Query: 427 KVPAAKSEWRWLLDRVSQKEKEMLAAYAADSGWYQMTIAATISASLWDNNQLRFPVVHQN 486
           ++   + EW  +    S+ E    A  A +  WY   I     A  WD+  +RFP+ H+N
Sbjct: 419 QIVDGRREWYHVSRLFSRDEMVAQARIAYEKEWYFPAIRTISQAQYWDDLDIRFPMAHRN 478

Query: 487 LFTLHGRKNGVDPITLMSLARQESALNPDAQSPVGARGLMQIMPDTARYTARKYQLSYSN 546
                 R   + P    ++ RQESA   DA+S VGA GLMQ+MP TA+ TA+++ +  ++
Sbjct: 479 ALVQASRAREIHPSWAFAVTRQESAFMADARSHVGATGLMQLMPATAKETAKRFNIPLAS 538

Query: 547 PDELYQVGKNIEIGSRYLSSLLERYDQNRILAFAAYNAGPSRVDSWLKRSQGKLDAYGFI 606
           P ++     NI++G+ YLS +  +++ NR+LA AAYNAGP RV  WL+ ++  L    ++
Sbjct: 539 PQQVLNPTTNIQLGTAYLSQIYGQFNGNRVLASAAYNAGPGRVRQWLRNAE-HLSFDVWV 597

Query: 607 EAIPFAETRGYVQNILMFETYYRDLMGVQGRFLNEHE 643
           E IPF ETR YVQN+L +   Y   +      +  HE
Sbjct: 598 ENIPFDETRQYVQNVLTYSVIYGQKLNSPQPLVEWHE 634