Pairwise Alignments

Query, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., probable soluble lytic transglycosylase from Synechococcus elongatus PCC 7942

 Score =  115 bits (289), Expect = 5e-30
 Identities = 157/637 (24%), Positives = 268/637 (42%), Gaps = 100/637 (15%)

Query: 37  QRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLT-PY-LDYRAFL-IDLGSKPPIAVRNFI 93
           QRA++  A     ++  A  Q ++    SYPL  PY L  RA +   LG  P    R  +
Sbjct: 80  QRARFLYALAIAPDQPQAALQALQGLERSYPLLGPYILKLRAQVQTQLGQDPRETWRQLL 139

Query: 94  DSHKEYPFSAR--IAAPYLD----ALARSKKWSALLQFQTQLPNGETYQCHYYNAKL-QT 146
           +++ E P  A   +A    D     + R  ++ A  +   QL   +  +   +  ++ Q 
Sbjct: 140 NTYPESPVQAEAVLALGQWDLAPATIQRWPRYPASNELARQLAKRQPAEAKRWLLQIAQF 199

Query: 147 GKRNEAFEG--AKKLWLNGASIADACDPLFAEWDRVGGLSDDWVLKRALLAFEGRNRNLI 204
           G+     +   ++   L   +  D      A W R     DD+     L A   +    +
Sbjct: 200 GRYRFDIDAVLSELQALPNLTARDRQQIADAYWQR-----DDYATAADLYARSPQTDETL 254

Query: 205 VYLQKKLDGKKSQAKA----QGMLELFDK-PERVLAYSRKASQDPINQ-KLAELALQKWA 258
               + LD       A    Q +L+ F + PER  A       DP N+ +  +L  +++A
Sbjct: 255 YRQARSLDLSSQPEVARTLYQQLLQRFPQSPERERALVHLVRLDPANRDRYLQLLERQFA 314

Query: 259 RSEPQEAQAVFNDVAKAQGWNQEQKGRVARFIAIRLMDTEEAAIAKWRDEVTRTSQDVRL 318
           RS P+           A G     + R    +  R   + EAA  +W+            
Sbjct: 315 RSLPE-----------ALGLAAATEPRYRPILLQRFPASPEAAALRWQQ----------- 352

Query: 319 IEARIRLALRENDWRGLSQWIAVLPEQERKTLRWQ------YWQGRSEIALGKKKEGTER 372
                  A ++ +   L Q IA++ +   ++   +      +W GR +  LG+       
Sbjct: 353 -------AWQQAEAGNLPQAIALVTQTRDRSPTIEAAAQAGFWLGRWQTQLGQTDAAQAA 405

Query: 373 LKALLGQR--SFYSVAAAKILQQSVNYPTSTVTLDMKQIKAHKKAL-------------A 417
            + +L Q   S+Y+  +A  L   V         D  Q++A + A              A
Sbjct: 406 WQWVLQQHPDSYYAWRSAAALGWPVG--------DFSQVQAQQPAWPQAQSPQALPAGSA 457

Query: 418 RIDELIALDKVPAAKSEWRWLLDRVSQKEKEMLAAYAADSGWYQMTIAATISASLWDNNQ 477
            + EL AL +   A   W+           +   +   ++   +   AA++   L  ++ 
Sbjct: 458 VLKELYALGQTEDAWRLWQQEGPSRDPSPSDRFISALLEASISRYDRAASLLKGLPIDSP 517

Query: 478 LR---------FPVVHQNLFTLHGRKNGVDPITLMSLARQESALNPDAQSPVGARGLMQI 528
           LR         +PVV +   T   +++ ++P+ ++ L RQES   P A S VGARGLMQ+
Sbjct: 518 LRQRSDFVSTLYPVVFKEEITAATQRDRLNPLLVLGLIRQESRFLPGATSVVGARGLMQL 577

Query: 529 MPDTARYTARKYQLSYSNPDELYQVG---KNIEIGSRYLSSLLERYDQNRILAFAAYNAG 585
           MP+TA   A +  L      + Y +G    NI++GSRYL ++L+ + ++ + A A+YNAG
Sbjct: 578 MPETAAEVAAELGL------QQYDLGDPQTNIQLGSRYLRNVLDYWREDSLFAIASYNAG 631

Query: 586 PSRVDSWLKRSQGKLDAYGFIEAIPFAETRGYVQNIL 622
           P  V++W++R  G+ D   ++E IPF ETR YV+ +L
Sbjct: 632 PGNVENWVRRF-GRSDRDRWLEQIPFPETRDYVEKVL 667