Pairwise Alignments

Query, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., soluble lytic murein transglycosylase, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  393 bits (1010), Expect = e-113
 Identities = 222/621 (35%), Positives = 338/621 (54%), Gaps = 10/621 (1%)

Query: 33  DLEAQRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLTPYLDYRAFLIDLGSKPPIAVRNF 92
           D++  R Q+ KA++ L E N AQY ++RK +D YPL  YLD+ A +  L   P    +  
Sbjct: 23  DIKDDRQQFLKAEKALREGNKAQYAKLRKGLDDYPLAVYLDFDAQIDSLVMLPGSKAQTA 82

Query: 93  IDSHKEYPFSARIAAPYLDALARSKKWSALLQFQTQLPNGETYQCHYYNAKLQTGKRNEA 152
           I + +  PF       YL   A+  +W   L      P     QCHYY A L  G ++ A
Sbjct: 83  IQAFQNTPFYGNARYRYLLTAAKGARWEDFLAISPDAPKDTALQCHYYQALLAVGDKSRA 142

Query: 153 FEGAKKLWLNGASIADACDPLFAEWDRVGGLSDDWVLKRALLAFEGRNRNLIVYLQKKLD 212
            EGA++LWLNG+S+ DACDPLF +W + G  S + +  R  LAF+ R  +L+ YL +K+ 
Sbjct: 143 NEGARRLWLNGSSMPDACDPLFTKWAKAGHRSQELIWSRMFLAFDAREASLLSYLAQKVT 202

Query: 213 GKKSQAKAQGMLELFDKPERVLAYSRKASQDPINQKLAELALQKWARSEPQEAQAVFNDV 272
               +A  Q +L L+  P  +    R  ++ P+  ++ EL L+  AR + +EA ++    
Sbjct: 203 NYPKEA--QKLLALYKDPRNLRHMDRYKAKAPVMAEMVELGLKALARKDLKEAVSLLGKY 260

Query: 273 AKAQGWNQEQKGRVARFIAIRLMDTEEAAIAKWRDEVTRTSQDVRLIEARIRLALRENDW 332
            K+  + + Q   +  F+  R++  +E ++  + ++         L E R+R A+R+ D 
Sbjct: 261 EKSGRFTKVQAQSLHAFMVRRVLLRQEESLLSYAEKHLPPLASDDLTELRLRWAIRDGDE 320

Query: 333 RGLSQWIAVLPEQERKTLRWQYWQGRSEIALGKKKEGTERLKALLGQRSFYSVAAAKILQ 392
           + + Q++ +L  +     RWQYW+ R E + G+    + +L A    RSFY   AA+   
Sbjct: 321 KAIKQFLPLLSRETAAKERWQYWRLRYETSAGESDTLSAQLAA---DRSFYGFHAAQSQG 377

Query: 393 QS-----VNYPTSTVTLDMKQIKAHKKALARIDELIALDKVPAAKSEWRWLLDRVSQKEK 447
            S     V     + + D    +    ALAR+ EL+ L++   A+ EW  LL R     K
Sbjct: 378 MSPALNEVKASDVSASSDANLTQGADPALARVKELLVLERPRQARVEWLGLLGREDAAGK 437

Query: 448 EMLAAYAADSGWYQMTIAATISASLWDNNQLRFPVVHQNLFTLHGRKNGVDPITLMSLAR 507
                +A ++G + +++ A+I    WD+  +RFP   +  F    +++ ++   L ++AR
Sbjct: 438 AKYGNWALENGLFALSVDASIQGKFWDDLGMRFPPAEEQSFARAAKRHKLNAEELRAIAR 497

Query: 508 QESALNPDAQSPVGARGLMQIMPDTARYTARKYQLSYSNPDELYQVGKNIEIGSRYLSSL 567
           +ESA NP AQS VGARGLMQ+MP TA+ TA+K  + YS    LY+   NI++GS Y +SL
Sbjct: 498 RESAFNPIAQSAVGARGLMQLMPATAKQTAKKQGIKYSGEGSLYEPALNIQLGSAYYASL 557

Query: 568 LERYDQNRILAFAAYNAGPSRVDSWLKRSQGKLDAYGFIEAIPFAETRGYVQNILMFETY 627
           LERY+ NR+LA AAYNAGPSRV++WL RS+GKLD   FIE+IPF ETR YVQ +  +   
Sbjct: 558 LERYNNNRVLATAAYNAGPSRVNAWLARSEGKLDVMAFIESIPFTETREYVQAVFSYRLI 617

Query: 628 YRDLMGVQGRFLNEHELNTKY 648
           Y    G      +E EL  KY
Sbjct: 618 YEHRKGNTTPLFSEAELKFKY 638