Pairwise Alignments

Query, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

 Score =  388 bits (997), Expect = e-112
 Identities = 225/621 (36%), Positives = 328/621 (52%), Gaps = 5/621 (0%)

Query: 30  STLDLEAQRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLTPYLDYRAFLIDLGSKPPIAV 89
           S   L   + +Y  A+  LD+  +  YQ +RKQ++ YPLTPYLDY A +  +   P    
Sbjct: 28  SAAGLTPTQQRYLDAREALDKGQLDSYQALRKQLNGYPLTPYLDYHAEIDSILDAPGAKA 87

Query: 90  RNFIDSHKEYPFSARIAAPYLDALARSKKWSALLQFQTQLPNGETYQCHYYNAKLQTGKR 149
              +      P        YL+   + K W   L    +LP     QC+YY A+L  G +
Sbjct: 88  LESMARFDGTPLYNSARHRYLENAGKQKHWQDFLAMSPELPRSINLQCYYYRAQLSQGDK 147

Query: 150 NEAFEGAKKLWLNGASIADACDPLFAEWDRVGGLSDDWVLKRALLAFEGRNRNLIVYLQK 209
             AF+GA+KLWL+G S    CDPLF  W++ G  S   +  R LLAF G    L+ YL  
Sbjct: 148 AAAFDGAEKLWLHGHSRPKECDPLFNAWEKAGNRSQSLLWSRMLLAFNGGEYGLLKYLAS 207

Query: 210 KLDGKKSQAKAQGMLELFDKPERVLAYSRKASQDPINQKLAELALQKWARSEPQEAQAVF 269
           K+   K +AK   +L ++  P  +    R   +  I   + +  L++ AR +  +A ++F
Sbjct: 208 KVTAHKKEAKQ--LLAVYQDPRSLRHTKRFKVKATIYGDIVDAGLRRLARKDLVKAVSLF 265

Query: 270 NDVAKAQGWNQEQKGRVARFIAIRLMDTEEAAIAKWRDEVTRTSQDVRLIEARIRLALRE 329
               KA  ++  Q  ++AR++  R +  +E  +  + D     +    L   R+R A+RE
Sbjct: 266 TKYEKAHRFSDYQGQKLARYLMKRALVAQETELKAFVDSRLPKTDSDDLKALRLRWAIRE 325

Query: 330 NDWRGLSQWIAVLPEQERKTLRWQYWQGRSEIALGKKKEGTERLKALLGQRSFYSVAAAK 389
            D + L  ++ +L E +R+  RWQYW  R ++  G +   T  L +L  QR+FY   AA 
Sbjct: 326 ADNQSLDNYLPLLSEAKRQKARWQYWIARRQMETGTEMAETA-LPSLSKQRNFYGFTAAD 384

Query: 390 ILQQSVNYPTSTVTLD--MKQIKAHKKALARIDELIALDKVPAAKSEWRWLLDRVSQKEK 447
           ++  S+N       LD  +         LAR++EL+ALDK   A++EW  LL R +Q ++
Sbjct: 385 LISTSINLAQIDTQLDESLTPQLTQDPGLARVEELLALDKKIDARAEWVLLLGRHTQNKQ 444

Query: 448 EMLAAYAADSGWYQMTIAATISASLWDNNQLRFPVVHQNLFTLHGRKNGVDPITLMSLAR 507
              A  A  + W+ +T+ A+I   LW++  LRFP      F    +   VD   + ++AR
Sbjct: 445 AQYALLAQRNQWHDLTVQASIQGQLWNDMTLRFPYAADEAFKAASKSAKVDIDEIRAIAR 504

Query: 508 QESALNPDAQSPVGARGLMQIMPDTARYTARKYQLSYSNPDELYQVGKNIEIGSRYLSSL 567
           +ESA  P A S VGARGLMQ+MP TA+ TARK+ + YS    LY V  N  +GSRY  SL
Sbjct: 505 RESAFYPYATSGVGARGLMQLMPATAKETARKHGMKYSGSKSLYDVSLNTALGSRYYKSL 564

Query: 568 LERYDQNRILAFAAYNAGPSRVDSWLKRSQGKLDAYGFIEAIPFAETRGYVQNILMFETY 627
           L+++D NR+LA AAYNAGP RV  WL++SQGKLD Y FIE+IPF ETR YVQ +L +   
Sbjct: 565 LDKFDGNRVLATAAYNAGPHRVTRWLEQSQGKLDVYAFIESIPFTETREYVQAVLSYRAI 624

Query: 628 YRDLMGVQGRFLNEHELNTKY 648
           Y+          +  EL  KY
Sbjct: 625 YQARQQKPVALFSAEELAFKY 645