Pairwise Alignments

Query, 555 a.a., energy-dependent translational throttle protein EttA from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  939 bits (2426), Expect = 0.0
 Identities = 458/555 (82%), Positives = 510/555 (91%)

Query: 1   MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDID 60
           MA++VY+M RV K+VPPK+QILKDISLSFFPGAKIGVLGLNG+GKSTLLRIMAGID +I+
Sbjct: 1   MAQFVYSMLRVGKVVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIE 60

Query: 61  GEARPQPGLKVGYLPQEPKLDESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDA 120
           GEARP PGLK+GYLPQEPKLD ++TVRE +EEAV++   ALKRLDEVYAAYAEPDADFDA
Sbjct: 61  GEARPMPGLKIGYLPQEPKLDPNQTVREAIEEAVSEAKNALKRLDEVYAAYAEPDADFDA 120

Query: 121 LAKEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLEN 180
           LAKEQGELEA+IQA++ HNLDN LERAA+ALRLP+WD +++ LSGGERRRVAICRLLLE 
Sbjct: 121 LAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEK 180

Query: 181 PDMLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPW 240
           P+MLLLDEPTNHLDAESVAWLE FL +YAGTVVAITHDRYFLDNAAGWILELDRGEGIPW
Sbjct: 181 PEMLLLDEPTNHLDAESVAWLEHFLQEYAGTVVAITHDRYFLDNAAGWILELDRGEGIPW 240

Query: 241 QGNYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNT 300
           +GNY+SWLEQKDARLKQE++ E ARQKTI KELEWVRQ  KGRQ+K KARMARFEEL   
Sbjct: 241 EGNYSSWLEQKDARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTN 300

Query: 301 EHQKRNETNELFIPPGERLGDKVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGA 360
           ++QKRNETNELFIPPG RLGDKVIEV NLTKS+  RVLID+LSFS+PKGAIVGIIG NGA
Sbjct: 301 DYQKRNETNELFIPPGPRLGDKVIEVNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGA 360

Query: 361 GKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNF 420
           GKSTLF+MLSG E+PDSG+IELG+TV+LASV+QFRDSMNDK+T++QEIS G DI+RINN 
Sbjct: 361 GKSTLFRMLSGSEQPDSGSIELGETVQLASVEQFRDSMNDKNTIWQEISGGQDIMRINNM 420

Query: 421 EIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETL 480
           EIP+RAY  RFNF+G DQQK+IG LSGGERNRVHLAKLL+AGGNVLLLDEPTNDLDVETL
Sbjct: 421 EIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL 480

Query: 481 RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGA 540
           RALEEA+LEFPGCAMVISHDRWFLDRIATHILDYRDEG+VNFYEGNYTEY  WLK T GA
Sbjct: 481 RALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGA 540

Query: 541 QAAEPHRIKYKRITK 555
              EPHR+KYKR+TK
Sbjct: 541 DVVEPHRLKYKRMTK 555