Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Histidine kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 34/261 (13%)

Query: 307 ALIIPLRAGDRVIGTIKLYEPKRKLFST----INMSMAQGIAQLLSSQILYGEYQQKQIL 362
           A +I LR     I  +KL      L+      +  S +  ++Q LS++ L    + K+ +
Sbjct: 135 AHLIALREKITEIPYVKLRSAAYTLYHLAAYLVEESYSNAVSQELSAKNLKLMEESKRRV 194

Query: 363 -----LSRAEIKLLQAQVNPHFLFNALNTISAV-IRREPDKARELILHLSQFFRSNLKQN 416
                L  AE++ L  QVNPHFLFN LNTI  + ++    K  +++   +   R  LK++
Sbjct: 195 ELEKSLREAELQALSYQVNPHFLFNVLNTIGRLALKEHAPKTEDMLYAFADMMRYVLKKS 254

Query: 417 -VETVTLREELAHVNAYLTIEKARFSDR----LDVEIAIDDALLERNVPSFTLQPLVENA 471
             + V+L+ E+ HV  YL I+K R  DR    +DV    D  L     P   L P+VEN+
Sbjct: 255 RSQIVSLQTEVGHVRNYLHIQKVRMGDRFTFTMDVPAKYDGIL----CPFMVLHPIVENS 310

Query: 472 IKHGTSNLLEAGKVRIYSEVVEGGMRVVVEDNA-------------GLYQPPSEDYDGLG 518
           I +        G++ I +      M + V DN              G+ +P       +G
Sbjct: 311 INYAIEPHEADGRIEITARDDGLNMILRVVDNGDGVSPELVRAALDGVAEPHGR--TSIG 368

Query: 519 MQIVEKRLTNKFGLKSGLQIE 539
           +  V+ RL + FG   GL +E
Sbjct: 369 LHNVDSRLRHFFGPDYGLTVE 389