Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., putative two-component system sensor but no kinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 16/191 (8%)

Query: 346 LLSSQILYGEYQQKQILLSRA-------EIKLLQAQVNPHFLFNALNTISAVIRREPDKA 398
           ++ ++IL+    ++ + L +        E+K L++Q +PHFLFNALNTI   +      A
Sbjct: 134 MIRNRILFKSLIEQSLQLEKVKVDQLETELKFLKSQYHPHFLFNALNTIYFQVDENNKVA 193

Query: 399 RELILHLSQFFRSNLKQNVETVTLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERN 458
           ++ I  LS   R  L    + VT+ +E+ ++ +Y+  ++ R S+RL +++  D  L E+ 
Sbjct: 194 KQSIEQLSDLLRYQLYDIEKEVTMEQEINYLRSYIAFQQLRMSERLMLDLYFDPQLKEQK 253

Query: 459 VPSFTLQPLVENAIKHGTSNLLEAGKVRIYSEVVEGGMRVVVEDNAGLYQPPS---EDYD 515
           +    LQPL+ENA K+        G  +I  E+   G ++  E    +   PS   +   
Sbjct: 254 IHPLLLQPLIENAFKY------VRGDYKIKLEIKVDGNQIQSEIKNSISSSPSTANKKEK 307

Query: 516 GLGMQIVEKRL 526
           G+G++ +++RL
Sbjct: 308 GIGIENLKRRL 318