Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., signaling protein without kinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)

Query: 351 ILYGEYQ--QKQILLSR----AEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILH 404
           ILY  YQ  QKQ  L R    +E+KLL+ Q+NPHFLFN LN I ++I   P+KA + ++ 
Sbjct: 122 ILYDWYQKKQKQKELKRQNLQSELKLLKNQLNPHFLFNTLNNIDSLICSYPEKASKSLVQ 181

Query: 405 LSQFFRSNL-KQNVETVTLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFT 463
           +S+  R  + + N   V L +EL +++ YL +++ ++ +   V   ++ +     V    
Sbjct: 182 MSEMMRYMIYETNTPEVDLSQELKYIHNYLDLQQLQYDNPNLVSYTLEGSPDNVRVAPML 241

Query: 464 LQPLVENAIKHGTSNLLEAGKVRIYSEVVEGGMRVVVEDNAGLYQPP----SEDYDGLGM 519
               +ENA KH T        +R++  + +  +   +     ++ P      +   G+G+
Sbjct: 242 FIAFIENAFKHCTDKKAPEA-IRLFFRIQKSEIYFEI---FNMFDPAKQINKDSSSGIGL 297

Query: 520 QIVEKRLTNKFGLKSGLQ 537
            I+++RL   +  +  LQ
Sbjct: 298 NIIKRRLDILYRRRYDLQ 315