Pairwise Alignments

Query, 558 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., putative two-component system sensor kinase, but no kinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.0 bits (149), Expect = 4e-14
 Identities = 56/230 (24%), Positives = 118/230 (51%), Gaps = 23/230 (10%)

Query: 302 CKLGSALIIPLRAGDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQI 361
           C+L  +L+ P      + GT  L+     L + I++SM           +L G+   + +
Sbjct: 100 CELLLSLVAPKLMMQDIWGTSFLFGLIASLVALIHLSM-----HFSDMIVLKGK---ENL 151

Query: 362 LLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQ-NVETV 420
            L +   + L  Q++PHF+FN+L++++ +I  +P  A + ++ LS  +R  L+  + E +
Sbjct: 152 ALQK---RYLMMQLDPHFVFNSLSSLAGMIGEDPKMAEDYVVKLSHIYRYILQHIDKEYI 208

Query: 421 TLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERN--VPSFTLQPLVENAIKHGTSN 478
           TL +    + +YL +   R+ +   + +  DD   +R+  + S +LQ ++ENA+KH   N
Sbjct: 209 TLADGTDFIKSYLGLLNMRYDNA--IVLHADDLHGDRDECILSLSLQLIIENAVKH---N 263

Query: 479 LLEAGKVRIYSEVVEGGMRVVVEDN---AGLYQPPSEDYDGLGMQIVEKR 525
             ++G + ++  +   G  +V+++N   A      S +  G+G+  +++R
Sbjct: 264 CPQSG-IELHVSLGRQGDMLVIKNNRIYANHNNDQSVESYGIGISNLKQR 312