Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., LytTR family DNA-binding domain-containing protein from Parabacteroides merdae CL09T00C40

 Score =  100 bits (250), Expect = 2e-26
 Identities = 81/247 (32%), Positives = 122/247 (49%), Gaps = 17/247 (6%)

Query: 2   LSALLIDDERFAREELAELLAE-SGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQI 60
           ++A ++DDE+  RE L  ++     QI +    S+  E    + + KPD++FLDI++   
Sbjct: 5   ITAAIVDDEQGNRENLLRMIGNYCPQIRISAICSSVTEARTVLPEAKPDILFLDIRLGDD 64

Query: 61  SGIELLSMLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLA----KTVQRLL 116
           +G  LL  L PE   EV+FVTAYD YA+QA   +A DYLLKP+D E L     K VQ +L
Sbjct: 65  TGFSLLGSL-PEIPFEVIFVTAYDSYAIQAIRFSALDYLLKPIDPEELTHAVDKAVQVVL 123

Query: 117 RQHKKSDYSPLTQ--PSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQL 174
           R+ +      L Q   +LD+     L+    +   E+       S  N  T   K+  +L
Sbjct: 124 RKQENKRMQNLLQNTQALDKQKKIALSVADKIEFVEIGSIIRCESESNYTTFYLKSGEKL 183

Query: 175 ----TLKVLEEKTA---LVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYL 227
               TLK  +E  A    +R H+ +L+NL  I+     + G   M    G  V +SR+  
Sbjct: 184 IVSKTLKEFDELLAPYHFLRVHQSHLINLDEIKSFIKSDGGYIRM--KDGASVSISRQRR 241

Query: 228 KELKEML 234
             + E+L
Sbjct: 242 NYVMEVL 248