Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., response regulator of the LytR/AlgR family from Dechlorosoma suillum PS

 Score =  111 bits (277), Expect = 2e-29
 Identities = 83/255 (32%), Positives = 128/255 (50%), Gaps = 29/255 (11%)

Query: 2   LSALLIDDERFAREELAELLAESG---QIEVIGQASNAIEGLKKINQLKPDVVFLDIQMP 58
           LS +L+DDE  AR  +  LL +        V+G+A +    L+ I Q++PDVV +DI+MP
Sbjct: 9   LSIVLVDDEAPARRRMGTLLEDLALELPTRVVGEAGDGEAALELIQQVQPDVVLVDIRMP 68

Query: 59  QISGIELLSMLDP-ETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAK------- 110
           ++ G+EL   L      P V+F TAYD +A+QAF+ NA DYLLKPV   RL         
Sbjct: 69  KMDGLELARHLAGLPRPPAVIFATAYDSHAVQAFDLNAVDYLLKPVRLARLQAALEKARL 128

Query: 111 ----TVQRLLRQHKKSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTA 166
               T +RL +  ++S      Q +     C    RI+L+P+ EV +  +D+  V  +T 
Sbjct: 129 VGPLTAERLAKVRQESG-----QGARRHFSCHERGRILLVPVQEVLYLKADLKYVTARTR 183

Query: 167 QQKATSQLTLKVLEEKTA--LVRCHRQYLVNLKAIREIKLLENGLAE-------MITHAG 217
           +++      L  LE++ A   +R HR  LV   A+   +  +    E       ++    
Sbjct: 184 EREYLLDEALTHLEQEFAERFIRLHRSVLVAKDALAGFERGQGDGEEGGEQWLALLKEVP 243

Query: 218 HKVPVSRRYLKELKE 232
            K+PVSRR    +K+
Sbjct: 244 EKLPVSRRQWATVKQ 258