Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., alginate biosynthesis regulatory protein AlgR-like protein from Marinobacter adhaerens HP15

 Score =  115 bits (287), Expect = 1e-30
 Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 6/238 (2%)

Query: 3   SALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQISG 62
           S L+ DDE  ARE +  L+       V G+A++    LK++ +L+PD++ LDI+MP + G
Sbjct: 6   SVLIADDEPLARERIRRLVEAVPGYRVCGEAADGDSCLKQVAELEPDILLLDIRMPGMDG 65

Query: 63  IELLSMLDP-ETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHKK 121
           +E  S L      P ++F TAYD YA+QAF+  A  YLLKPV  E LA+ + R  R ++ 
Sbjct: 66  MEAASRLSQLANPPALIFCTAYDHYAIQAFDVQAIAYLLKPVRKEALAEALARAGRVNRV 125

Query: 122 SDYSPLTQP--SLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLTLKVL 179
              +   Q   S +Q+         L+ ++E+ +  +D   V +  A+ +     TLK L
Sbjct: 126 QLQALNGQAAHSQEQLAVRTHRGTELIDLSEILYCEADQKYVTIHHARGETVCDYTLKEL 185

Query: 180 EEK--TALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGH-KVPVSRRYLKELKEML 234
           E    + L+R HR  LV ++ I+ ++   +G   +    G  ++PVSRR+   +++ L
Sbjct: 186 ENSYPSTLLRIHRNTLVGVRFIQALRRTPDGHNLVALREGRGELPVSRRHASNVRQWL 243