Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  266 bits (680), Expect = 3e-76
 Identities = 128/236 (54%), Positives = 186/236 (78%), Gaps = 1/236 (0%)

Query: 1   MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQI 60
           M++ L++DDE FAREELA+ L++   IE+IGQ SNAIE L+ I + KP +VFLDIQMP+I
Sbjct: 1   MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60

Query: 61  SGIELLSMLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK 120
           SG+EL++MLDP+T+P++VFVTA+D++A++AF+++AFDYLLKP+D +RL+KT++R+ +   
Sbjct: 61  SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120

Query: 121 KSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLTLKVLE 180
               + +   SL+ +PC   +++ ++PI +VE+ +SD+SG++V   + K  +QLTLKVLE
Sbjct: 121 PQAVNLIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTLKVLE 180

Query: 181 EKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGF 236
           EKT LV CHRQYL++ KAI EI+LL+ G AE+ T  G KVPVSRRYLK LK++ GF
Sbjct: 181 EKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFGF 235