Pairwise Alignments

Query, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., DNA-binding response regulator LytR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  115 bits (289), Expect = 6e-31
 Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 22/255 (8%)

Query: 2   LSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQIS 61
           + AL++DDER AR+EL  LL+    +E + +A++A E L  I    PD+VF DI+MP   
Sbjct: 3   IRALVVDDERPARDELVYLLSAHADVETM-EAASAGEALSLIASHHPDLVFQDIEMPGRG 61

Query: 62  GIELLSMLDPETMPEV-VFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK 120
           G ++L      T P V VFVTA+DQ+A++AF++NA DYLLKPV  ERLA+ ++R+ ++  
Sbjct: 62  GFDVLQAASLMTNPPVFVFVTAFDQHAIRAFDENAADYLLKPVAPERLARCLERVRQRLA 121

Query: 121 KSDYSPLTQPSLDQI--------PCTGL-----NRIVLLPINEVEFAYSDISGVNVQTAQ 167
               S   +  +D++        P   +      RI L+P  EV    ++   + V T  
Sbjct: 122 PDGGSTQVEDMMDRLLARIGRERPLPRIAVEQGGRIHLVPTPEVVLIEAEEKRIAVVTEA 181

Query: 168 QKAT--SQLTLKVLEEKTA---LVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHK--V 220
            + T     +L  +E++ A     R +R  LVNL+ + E     NG   ++ +   +  V
Sbjct: 182 GRFTCHGAQSLARIEDRLAGQPFFRANRAVLVNLERVAEFSPWYNGKYHLVMNDSERTGV 241

Query: 221 PVSRRYLKELKEMLG 235
            VSR  +++ K+ LG
Sbjct: 242 TVSRNRVRDFKQALG 256