Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Glycoside hydrolase, family 3, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  267 bits (682), Expect = 3e-76
 Identities = 152/322 (47%), Positives = 201/322 (62%), Gaps = 9/322 (2%)

Query: 2   GPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGV 61
           G L +DVAG  L++EDR+ L+ P VGG+I+F RN    +Q+  L+ AIR A +  +L+ V
Sbjct: 7   GSLMVDVAGTWLTSEDRQFLRQPEVGGLIIFARNIEHPRQVRELSAAIR-AVRPDLLLAV 65

Query: 62  DQEGGRVQRFREGFSRIPPAQYYARAENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMG 121
           DQEGGRVQR REGF R+PP +  A   +   LAE  GWLMA E++A  +DLSFAPVLD+ 
Sbjct: 66  DQEGGRVQRLREGFVRLPPMRAIADKPDAELLAEHCGWLMATEVLAVGLDLSFAPVLDLD 125

Query: 122 FACKAI-GNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDE 180
           +   A+ G R+F  D Q     + AF+RGM A GMA TGKHFPGHG   ADSH+  P DE
Sbjct: 126 YQRSAVVGTRSFEGDPQRAALLAGAFIRGMNATGMAATGKHFPGHGWAEADSHVAIPNDE 185

Query: 181 R---ETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKG 237
           R   E  A D+  F    +   L A+MPAHV+YP  D+QPA  S  WL+ +LR+EL F G
Sbjct: 186 RSLEEIRANDLVPFARLSQQ--LAAVMPAHVIYPKVDSQPAGFSRRWLQDILRDELQFDG 243

Query: 238 IVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEAL 297
           ++FSDDLSM GA V+G    R   AL AGCDM L+CN R AA   L     ++V  +  +
Sbjct: 244 VIFSDDLSMAGAHVVGDAASRIEAALTAGCDMGLVCNDRAAAELALGAAQRLKVKPSPRI 303

Query: 298 LKKQQF--SYSELKRLERWQQA 317
            + +    + ++ ++  RWQ A
Sbjct: 304 ARMRGLASASTDYRQHPRWQAA 325