Pairwise Alignments

Query, 330 a.a., beta-hexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., beta-hexosaminidase (RefSeq) from Shewanella loihica PV-4

 Score =  271 bits (694), Expect = 1e-77
 Identities = 151/309 (48%), Positives = 198/309 (64%), Gaps = 13/309 (4%)

Query: 6   LDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEG 65
           +D+   E++A+++  L HP VGG+ILF RNY D  QL AL  ++R A +  +LI VD EG
Sbjct: 2   MDLLSTEMNAQEQAQLMHPMVGGLILFSRNYQDRDQLCALVASVR-ALRPDLLIAVDHEG 60

Query: 66  GRVQRFREGFSRIPP-AQYYARAENGVELAE----QGGWLMAAELIAHDVDLSFAPVLDM 120
           GRVQRF +GFS+IP        A+  ++LA+    + G+LMA EL+A D+DLSFAPVLD+
Sbjct: 61  GRVQRFIDGFSKIPAMGDILPAAKQDLQLAKGWARELGFLMAVELLACDIDLSFAPVLDL 120

Query: 121 GFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDE 180
               + IG RAF +    V+  + AF++GM+  GMA  GKHFPGHG+V ADSH+  P DE
Sbjct: 121 NGISQVIGTRAFSDKPDEVIALAEAFIQGMQDAGMAAVGKHFPGHGSVAADSHIAKPVDE 180

Query: 181 R---ETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKG 237
           R   E  A DM  F   + A  L  +MPAHV+YP  D  PA  SSYWLKQVLREEL F G
Sbjct: 181 RSEAEIRALDMVPFAHLMGAKRLQGVMPAHVIYPKVDPNPAGFSSYWLKQVLREELKFDG 240

Query: 238 IVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIME----VPQ 293
           ++FSDDL M+GA V+GG  ER+  A+ AGCDMIL+CN  +   E+L +    E    VP 
Sbjct: 241 VIFSDDLGMKGAGVVGGYPERASAAIKAGCDMILLCNDSQGVSELLTSFEWPEQGPQVPA 300

Query: 294 AEALLKKQQ 302
            + L  + Q
Sbjct: 301 RKLLANRPQ 309