Pairwise Alignments

Query, 599 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  260 bits (665), Expect = 1e-73
 Identities = 163/402 (40%), Positives = 245/402 (60%), Gaps = 10/402 (2%)

Query: 7   IALTIAAVGVVGLGCQWLAWRLRLPAILFLLLAGILAGPV-FGVLNPEALMGDLLFPLVS 65
           + +T+AA    G+  Q LA   +LP I+FLLL G+L GP     + PE L G+ L  LVS
Sbjct: 11  LIVTVAA----GIAAQVLASWAKLPGIVFLLLTGLLLGPDGLNWVQPEQL-GEGLETLVS 65

Query: 66  LAVAVILFEGSLTLNFKEIRGVSNTVWSIVTVGALVSWGITSTAAHWLLGFEWPLALMFG 125
           L+VA+ILFEG L+L+ + +  VS ++ +++T+GA ++    + AAH    F WPLA ++G
Sbjct: 66  LSVALILFEGGLSLDLRNLLQVSGSLRNLITLGAGITILGGAIAAHRFSEFPWPLAFLYG 125

Query: 126 SLTVVTGPTVIVPLLRTVRPTARLANILRWEGILIDPLGALFVVMVYEFIVSSSHAHSLE 185
           ++ VVTGPTV  PLLR V+   +++ +L  EG+LIDP+GA+  V+V  F++S S    L 
Sbjct: 126 AIVVVTGPTVTTPLLRQVQADPKVSTLLEGEGVLIDPIGAIVAVVVLNFVLSGSQDVGLV 185

Query: 186 VFSLIL--LVGFSIGIASGVAVAAVLRR-GLLPEYLQPFAVLSVVLGVFAASNALESESG 242
           +  LIL  +VG   G   G  +A  LR+   L E L+   VL+ +  +F A+ A+ SE+G
Sbjct: 186 LEGLILRLVVGAIAGSVGGGLLALFLRQVRFLSEELRTLVVLAALWAIFGAAQAVVSEAG 245

Query: 243 LLTVTVMGMWLANAKGVNIQHILHFKEHLTILLITGLFILLAARIEVADFQALGWSALGL 302
           LL V + G+ L      +++ I  FK  LT L I+ LF+LLAA + +A   ALGW     
Sbjct: 246 LLAVVIAGLLLRAVAIPDLEAIKTFKGQLTTLAISILFVLLAADLSIASLFALGWGGPLT 305

Query: 303 FVVMQLLARPASIFISTLRSTLNVREKAFLAWVAPRGIVAASISSLFAIKLMEFGIADAK 362
            + + LL RP SI + T  S LN  +KAFL+W+APRGI++AS++SLFAI L + G+A   
Sbjct: 306 VLALMLLVRPLSIGLCTWGSDLNWAQKAFLSWIAPRGIISASVASLFAILLTDRGLAGGA 365

Query: 363 LLVPLTFMVIIGTVVLQSATARPMALALKVSEPAPKGFLIIG 404
            +    F+ I+ TV LQ  +A+ +A  L V +  P+  +++G
Sbjct: 366 AIKAQVFLTILMTVFLQGLSAKTVAKKLGVLD-RPEQIVLVG 406