Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., Carbon starvation protein, predicted membrane protein from Pseudomonas stutzeri RCH2

 Score =  154 bits (390), Expect = 6e-42
 Identities = 147/556 (26%), Positives = 239/556 (42%), Gaps = 78/556 (14%)

Query: 5   LTCVAALVGGYFIYGAFV-EKVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLLNIAG 63
           L  + A+  GY  Y  F+ E+++ ++    TPAHT  DGVDYVP +   ++     ++AG
Sbjct: 8   LVGLIAMALGYVFYSKFIAERIYRLDPHYLTPAHTMRDGVDYVPTNKFVLWGHHFTSVAG 67

Query: 64  VGPIFGPIMGALYG-PAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRYLG-N 121
             PI GP +  ++G   A  W++ G IF   VHD+ +   S R+ G SV  ++GR +G  
Sbjct: 68  AAPIVGPAIAVIWGWGPAFAWVIFGTIFFAGVHDFGALWASARSRGQSVGMLSGRLIGAR 127

Query: 122 GAKHFMNIFAIVLLLLVGV-------VFVSAPAGMI-------TNLINQQTDFTVSMTTM 167
           G   F+ +  +VLL++ G        + VS P  +I         L+  Q  +  +M  +
Sbjct: 128 GRSLFLVVIFLVLLMVNGAFAAVISNLLVSTPTSVIPVWGAILVALVIGQMIYRYNMKLL 187

Query: 168 ------VVIIFAYYILATIVPV---DKIIGR-----------FYPLFGALL--------- 198
                 V++++A  +L    PV   D+I+G             Y    +LL         
Sbjct: 188 WPSLGGVIVLYALILLGNQYPVALPDEIMGLSAKSVWILLLFVYAAIASLLPVWVLLQPR 247

Query: 199 -------IFMSVGLM-TAIAFSSEHQVLGGFEISDMVKNLNPNDMPLWPALFITIACGAI 250
                  +F+ +GL+  A+ F +   V   F      + L  +   + P LF+TIACGAI
Sbjct: 248 DYINGLQLFVGLGLLYLAVLFGAPELVAPAFN-----QELPADTPSIVPLLFVTIACGAI 302

Query: 251 SGFHA-TQSPLMARCMENEKNGRFVFYGAMIGEGII---ALIWCTVALSFFGSLEALSEA 306
           SGFH    S   ++ ++ E + RFV Y   +GEG++   A+I CT   +     + +  A
Sbjct: 303 SGFHGLVASGTTSKQLDKETDARFVGYFGAMGEGMLSLAAIICCTAGFATLTDWQQVYTA 362

Query: 307 VKNGG------PGNVVYGASFGLLGVFGGVIAFLGVVILPITSGDTAFRSSRLIL---AE 357
             +GG       G  +     GL    GG I  +  ++   T+ DT  R  R ++    E
Sbjct: 363 FGSGGVTAFVQGGGTLLANGLGLPAELGGTILAVMAILFAGTTMDTGLRLQRFVIQEAGE 422

Query: 358 YFNMEQKTLRNRLLM--AVPLFVIGAVLTQVDFGIIWRYFGFANQATAVMMLWTATAYLM 415
              M+  TL   L+          GA        +IW  FG  NQ  A + L   T  L+
Sbjct: 423 LAGMKVNTLIGTLIAVGVCMALAFGAGSDGTGGMVIWPLFGTTNQLLAGLTLAVITVILI 482

Query: 416 RHNKLHWICTVPALFMTTVCISFILNSSTLGF----GLPMQISTIAGVLASLGALAYVAK 471
           +  +      VP +F+  + I  +L      +     L + +  I  + A    L  V  
Sbjct: 483 KLGRSPLYTLVPLVFLLAMSIYALLVQMGQFYRAENWLLLGMDVIILIAALWVTLEAVIA 542

Query: 472 VSKGKGETDLADEEKP 487
           + KG+   + A E +P
Sbjct: 543 MRKGRDPAEQAFEAQP 558