Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., carbon starvation protein CstA (RefSeq) from Shewanella loihica PV-4

 Score =  727 bits (1877), Expect = 0.0
 Identities = 355/484 (73%), Positives = 409/484 (84%), Gaps = 7/484 (1%)

Query: 1   MLWFLTCVAALVGGYFIYGAFVEKVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLLN 60
           M+WFL CV  L+GGYFIYG FVEKVFGIN  RQTPA TKTDGVDYVPMS  KVYL+QLLN
Sbjct: 1   MMWFLMCVGLLLGGYFIYGKFVEKVFGINTARQTPAFTKTDGVDYVPMSKGKVYLIQLLN 60

Query: 61  IAGVGPIFGPIMGALYGPAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRYLG 120
           IAGVGPIFGPI+GALYGPAAMLWIV+GCIFAGAVHDYFSGMLS+RN G SVP++ G+YLG
Sbjct: 61  IAGVGPIFGPILGALYGPAAMLWIVIGCIFAGAVHDYFSGMLSVRNNGQSVPNLAGKYLG 120

Query: 121 NGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINQQTDFTVSMTTMVVIIFAYYILATI 180
           N AKHFMN+FAI+LLLLVGVVF+SAPAG++  L    T + VS+   + IIF YY++ATI
Sbjct: 121 NSAKHFMNVFAIILLLLVGVVFISAPAGLLGKL----TGWDVSL--FLGIIFTYYLIATI 174

Query: 181 VPVDKIIGRFYPLFGALLIFMSVGLMTAIAFSSEHQVLGGFEISDMVKNLNPNDMPLWPA 240
           VPVDKIIGR YP FGALL+FMSVGL  A+  SSEH +L GF   D + NLNPNDMPLWPA
Sbjct: 175 VPVDKIIGRLYPFFGALLLFMSVGLTIALIVSSEHTLLPGFSAGDFLSNLNPNDMPLWPA 234

Query: 241 LFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCTVALSFFGSL 300
           LFITIACGA+SGFHATQSPLMARC+ENE NGRFVFYGAMIGEGIIALIWC +ALSFFG +
Sbjct: 235 LFITIACGAVSGFHATQSPLMARCVENESNGRFVFYGAMIGEGIIALIWCAIALSFFGGV 294

Query: 301 EALSEAVKNGGPGNVVYGASFGLLGVFGGVIAFLGVVILPITSGDTAFRSSRLILAEYFN 360
           E L+  +  G P NVVY AS GLLG  GG +A LGV++LPITSGDTAFRS+RLIL+E+F 
Sbjct: 295 EGLNAGMA-GNPANVVYEASTGLLGAVGGFMAILGVIVLPITSGDTAFRSARLILSEFFK 353

Query: 361 MEQKTLRNRLLMAVPLFVIGAVLTQVDFGIIWRYFGFANQATAVMMLWTATAYLMRHNKL 420
           M Q  L  RL++A+PLFVIGA+LTQVDFG+IWRYFG ANQ TAVMMLWTA+AYL+RHNKL
Sbjct: 354 MPQTALPKRLVLAIPLFVIGAILTQVDFGVIWRYFGVANQTTAVMMLWTASAYLLRHNKL 413

Query: 421 HWICTVPALFMTTVCISFILNSSTLGFGLPMQISTIAGVLASLGALAYVAKVSKGKGETD 480
           HWICTVPA+FMTTV ISF+LNS+TLG GLPM +STIAGV+++L   A +   +KG+GE +
Sbjct: 414 HWICTVPAMFMTTVVISFLLNSATLGAGLPMTVSTIAGVVSTLVITALIIVKTKGRGEEE 473

Query: 481 LADE 484
           L +E
Sbjct: 474 LPEE 477