Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., hypothetical carbon starvation protein A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  598 bits (1541), Expect = e-175
 Identities = 289/399 (72%), Positives = 334/399 (83%), Gaps = 7/399 (1%)

Query: 1   MLWFLTCVAALVGGYFIYGAFVEKVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLLN 60
           M+WFL CV  L+GGYFIYG FVEKVFGINEKRQTPA ++TDGVD+VPMS  KVYL+QLLN
Sbjct: 1   MMWFLLCVGLLIGGYFIYGTFVEKVFGINEKRQTPAFSQTDGVDFVPMSKGKVYLIQLLN 60

Query: 61  IAGVGPIFGPIMGALYGPAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRYLG 120
           IAGVGPIFGPI+GALYGP+AMLWIV+GCIF GAVHDYFSGMLS+RNGG SVP++ G+YLG
Sbjct: 61  IAGVGPIFGPILGALYGPSAMLWIVIGCIFGGAVHDYFSGMLSVRNGGQSVPNLAGKYLG 120

Query: 121 NGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINQQTDFTVSMTTMVVIIFAYYILATI 180
             AKHFMN+FAIVLLLLVGVVF+SAPAG++  L        + ++  V IIF YY++AT+
Sbjct: 121 KSAKHFMNVFAIVLLLLVGVVFISAPAGLLGKLTG------LDVSIFVGIIFVYYLIATV 174

Query: 181 VPVDKIIGRFYPLFGALLIFMSVGLMTAIAFSSEHQVLGGFEISDMVKNLNPNDMPLWPA 240
           VP+DKIIGR YP FGALL FMS GL  AI FSSEH +L   +  D  KNLNP+DMPLWPA
Sbjct: 175 VPIDKIIGRLYPFFGALLFFMSFGLAFAIMFSSEHTLLPNVQAGDFFKNLNPDDMPLWPA 234

Query: 241 LFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCTVALSFFGSL 300
           LFITIACGAISGFHATQSPLMARC+ENEKNGRFVF+GAMIGEG+IAL+WC +ALS+F  +
Sbjct: 235 LFITIACGAISGFHATQSPLMARCVENEKNGRFVFFGAMIGEGVIALLWCAIALSYFHGV 294

Query: 301 EALSEAVKNGGPGNVVYGASFGLLGVFGGVIAFLGVVILPITSGDTAFRSSRLILAEYFN 360
           E L+  +  G P NVVY AS GLLG  GG +A LGV+ILPITSGDTAFRS+RLILAE+F 
Sbjct: 295 EGLNTGMA-GNPANVVYEASTGLLGAVGGFMAILGVIILPITSGDTAFRSARLILAEFFK 353

Query: 361 MEQKTLRNRLLMAVPLFVIGAVLTQVDFGIIWRYFGFAN 399
           M Q TL  RL++A+PLFVIG +LTQVDFG+IWRYFG AN
Sbjct: 354 MPQVTLPKRLVLAIPLFVIGGLLTQVDFGVIWRYFGVAN 392