Pairwise Alignments

Query, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., carbon starvation protein CstA (RefSeq) from Shewanella sp. ANA-3

 Score =  438 bits (1127), Expect = e-127
 Identities = 226/481 (46%), Positives = 306/481 (63%), Gaps = 13/481 (2%)

Query: 1   MLWFLTCVAALVGGYFIYGAFVEKVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLLN 60
           M  F  C+A LV  Y  Y  FVE+  GI+ K QTP     DGVDYVP+   K +L+Q LN
Sbjct: 1   MFIFFLCLALLVLAYKFYSPFVERQAGIDPKAQTPQARFEDGVDYVPVHPAKAFLIQFLN 60

Query: 61  IAGVGPIFGPIMGALYGPAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRYLG 120
           +AGVGPIFGPI+GALYGP A+LWIV+G I  GAVHDYFSG+LSI+  G S+P I G Y  
Sbjct: 61  VAGVGPIFGPILGALYGPVALLWIVLGNIIGGAVHDYFSGVLSIKEDGKSLPEIAGHYFN 120

Query: 121 NGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINQQTDFTVSMTTMVVIIFAYYILATI 180
              K  M +F  +LL  VGVVF+ +PAG+++NL   +     + T  V++I AYY LAT+
Sbjct: 121 VYFKGVMLLFTAMLLFFVGVVFIMSPAGLLSNLDYFKDTIFGNNTFWVLVILAYYFLATM 180

Query: 181 VPVDKIIGRFYPLFGALLIFMSVGLMTAIAFSSEH-----QVLGGFEISDMVKNL---NP 232
           +P+DKII + YP FG L+I M+  +  A+  S+        V   F  S     L   NP
Sbjct: 181 LPIDKIITKLYPAFGLLMIVMTTSIAVALLISAPQLPEMGDVFAYFNHSHYNNELLEPNP 240

Query: 233 NDMPLWPALFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCTV 292
           + +P+WP LF+TI CGAISGFH+TQ+P+MARC+ NEK  R V+YGAM+ EG++A +W T 
Sbjct: 241 DGLPIWPLLFVTITCGAISGFHSTQAPIMARCLTNEKYVRPVYYGAMVAEGVVACVWATA 300

Query: 293 ALSFF-GSLEALSEAVKNGGPGNVVYGASFGLLGVFGGVIAFLGVVILPITSGDTAFRSS 351
            ++ F G    L   +  GGPG VV   +   LGV GGV+A + V + PITSGDTAFRS 
Sbjct: 301 GIAAFPGGYVELKSLLDQGGPGLVVNQVATSYLGVLGGVMAIIAVAVFPITSGDTAFRSL 360

Query: 352 RLILAEYFNMEQKTLRNRLLMAVPLFVIGAVLTQVDFGIIWRYFGFANQATAVMMLWTAT 411
           RL + + FN+ Q ++RNRLL+A P+  I   +T++DF +IWRYF F+N   +  +LW AT
Sbjct: 361 RLTIIDAFNIPQ-SMRNRLLVAAPILTIAYFMTKIDFSLIWRYFAFSNMLLSTSVLWLAT 419

Query: 412 AYLMRHNKLHWICTVPALFMTTVCISFILNSSTLGFGLPMQISTIAGVLASLGALAYVAK 471
            YL      HWI ++PA+  T V IS+I+ +  +G GLP  +S   G+  ++G +  VA 
Sbjct: 420 KYLFDRGSFHWIVSLPAIAGTCVTISYIMTAG-IGLGLPQSLSQPVGI--AVGVVCLVAL 476

Query: 472 V 472
           +
Sbjct: 477 I 477