Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Synechococcus elongatus PCC 7942

 Score =  113 bits (283), Expect = 7e-30
 Identities = 94/339 (27%), Positives = 154/339 (45%), Gaps = 54/339 (15%)

Query: 3   ILLANPRGFCAGVDRAISIVERALELY-QPPIYVRHEVVHNRFVVEGLKQRGARFV---- 57
           I LA   GFC GV+RA++I     + + Q  I++ +E++HN  V + L++    F+    
Sbjct: 57  IRLAEAFGFCWGVERAVAIAYETRQHFPQERIWITNEIIHNPSVNQHLREMSVEFIPCER 116

Query: 58  --EELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKHME 115
             ++ + V   ++VI  A G S    Q   E+   + D TCP V+KV   V +  R    
Sbjct: 117 GEKDFSVVDRGDVVILPAFGASVQEMQLLDEKGCHIVDTTCPWVSKVWNTVEKHKRGAHT 176

Query: 116 VVLIGHAGHPEVEGT--------------MGQYASD---TGG---MYLVEKPEDVVSLQA 155
            ++ G   H E   T                QY  D    GG    ++    +   +   
Sbjct: 177 SIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNGGDRDEFMTRFGKACSAGFD 236

Query: 156 KVKDPSNLHYVSQTTLSVDETADVIDELRRVFPKIQGPRK--------DDICYATQNRQD 207
             +D   +   +QTT+   ET  +     R   K  GP+         + IC ATQ RQD
Sbjct: 237 PDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQD 296

Query: 208 AV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDIDP----------- 255
           A+ +++ E +D++VV+G  NSSN+T L+E+A +   P + ID  + I P           
Sbjct: 297 AMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHT 356

Query: 256 ------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 287
                  W     L IG+T+GAS P+++V  +++R+ +L
Sbjct: 357 DLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDL 395