Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Shewanella loihica PV-4

 Score =  425 bits (1093), Expect = e-124
 Identities = 216/311 (69%), Positives = 254/311 (81%), Gaps = 2/311 (0%)

Query: 1   MKILLANPRGFCAGVDRAISIVERALELYQPPIYVRHEVVHNRFVVEGLKQRGARFVEEL 60
           ++I LANPRGFCAGVDRAISIVERALEL+ PPIYVRHEVVHNR+VV+ LK RGA FV+EL
Sbjct: 8   LQIKLANPRGFCAGVDRAISIVERALELFSPPIYVRHEVVHNRYVVQNLKDRGAVFVDEL 67

Query: 61  NEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKHMEVVLIG 120
           ++VPDD+IVIFSAHGVSQAVR EAK+R L VFDATCPLVTKVH++V RASRK +E +LIG
Sbjct: 68  DQVPDDSIVIFSAHGVSQAVRAEAKKRGLRVFDATCPLVTKVHLQVTRASRKGIECILIG 127

Query: 121 HAGHPEVEGTMGQYASDTGGMYLVEKPEDVVSLQAKVKDPSNLHYVSQTTLSVDETADVI 180
           HAGHPEVEGTMGQY +  GG+ LVE P DV +L   VKDP NL +V+QTTLS+D+TADVI
Sbjct: 128 HAGHPEVEGTMGQYDNPEGGVLLVESPADVEAL--VVKDPDNLCFVTQTTLSMDDTADVI 185

Query: 181 DELRRVFPKIQGPRKDDICYATQNRQDAVRILAEQVDVMVVVGSKNSSNSTRLKELAEKL 240
             L++ FP IQGPRKDDICYATQNRQDAVR +A+ VD+ +VVGSKNSSNS RL ELA K 
Sbjct: 186 AALQKRFPSIQGPRKDDICYATQNRQDAVRNVADDVDLFIVVGSKNSSNSNRLMELAIKK 245

Query: 241 GTPGYLIDCPQDIDPEWFVDAQLIGVTAGASAPEELVNQILDRIKELGATSVEEVLGREE 300
           GT  YL+D   DI PEWF D + + VTAGASAPE LV Q++D I +L  + + EV GR+E
Sbjct: 246 GTQSYLVDNADDIKPEWFNDIEKVAVTAGASAPEVLVQQVIDAIAKLAPSVITEVEGRKE 305

Query: 301 NMFFEVPKELQ 311
           +  F VP EL+
Sbjct: 306 DTVFAVPAELR 316