Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  118 bits (296), Expect = 1e-31
 Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 6/280 (2%)

Query: 1   MKILLANPRGFCAGVDRAISIVERALELYQPPIYVRHEVVHNRFVVEGLKQRGARFVEEL 60
           MKI+ A   GFC GV  A+  ++R +     PI     ++HN  V+   ++RG R + + 
Sbjct: 1   MKIIRARTAGFCMGVSLALRKLDREVTENNAPIATLGPIIHNPQVMAHYEERGVRCLRDT 60

Query: 61  NEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKHMEVVLIG 120
            +V     V+  AHG+  A     K    +V DATCP V +  + +A    +   ++L G
Sbjct: 61  AQVVPGQRVVIRAHGIPVAEETALKATGASVVDATCPKVKRAQLGIAEERGRGGTLLLFG 120

Query: 121 HAGHPEVEGTMGQYASDTGGMYLVEKPEDVVSLQAKVKDPSNLHYVSQTTLSVDETADVI 180
            A HPEV G +  YA +  G  +    +++  L   ++D       +QTT       DV+
Sbjct: 121 EADHPEVRGLL-SYAGE--GAMVFGSLDELKGL--PLRDDVAYFLAAQTTQDRAGFEDVV 175

Query: 181 DELRRVFPKIQGPRKDDICYATQNRQDAVRILAEQVDVMVVVGSKNSSNSTRLKELAEKL 240
             LR+       P    IC AT+ RQ     +A +V  MVVVG  +S N+ RL ++A   
Sbjct: 176 SWLRQRLGH-DIPVLQTICDATRKRQQEAVDIARRVQAMVVVGGFDSGNTRRLADVARAQ 234

Query: 241 GTPGYLIDCPQDIDPEWFVDAQLIGVTAGASAPEELVNQI 280
           G     ++    +  +      +IG+TAGAS P+ L++ +
Sbjct: 235 GVFTVHVETVDQLPVDELRKKSVIGLTAGASTPKSLIDAV 274