Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., penicillin tolerance protein LytB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  422 bits (1086), Expect = e-123
 Identities = 212/311 (68%), Positives = 252/311 (81%), Gaps = 2/311 (0%)

Query: 1   MKILLANPRGFCAGVDRAISIVERALELYQPPIYVRHEVVHNRFVVEGLKQRGARFVEEL 60
           + I+LANPRGFCAGVDRAISIVERALEL+ PPIYVRHEVVHNR+VV+ LK RGA FVEEL
Sbjct: 10  LNIMLANPRGFCAGVDRAISIVERALELFSPPIYVRHEVVHNRYVVQNLKDRGAVFVEEL 69

Query: 61  NEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKHMEVVLIG 120
           ++VPD+NIVIFSAHGVSQAVR EAK R L VFDATCPLVTKVH++V RASRK +E +LIG
Sbjct: 70  DQVPDNNIVIFSAHGVSQAVRAEAKARGLRVFDATCPLVTKVHLQVTRASRKGIECILIG 129

Query: 121 HAGHPEVEGTMGQYASDTGGMYLVEKPEDVVSLQAKVKDPSNLHYVSQTTLSVDETADVI 180
           HAGHPEVEGTMGQY +  GG+YL+E P DV +L+  V+DP+NL +V+QTTLSVD+T D+I
Sbjct: 130 HAGHPEVEGTMGQYDNPNGGVYLIESPADVETLE--VRDPNNLCFVTQTTLSVDDTLDII 187

Query: 181 DELRRVFPKIQGPRKDDICYATQNRQDAVRILAEQVDVMVVVGSKNSSNSTRLKELAEKL 240
             L + FP I+GPRKDDICYATQNRQDAVR L+  VD+++VVGSKNSSNS RL+ELA K 
Sbjct: 188 SALLKRFPSIEGPRKDDICYATQNRQDAVRNLSADVDLLIVVGSKNSSNSNRLRELALKT 247

Query: 241 GTPGYLIDCPQDIDPEWFVDAQLIGVTAGASAPEELVNQILDRIKELGATSVEEVLGREE 300
           GT  YL+D   DID  WF +   + VTAGASAPE LV Q++  I +L  + V EV GR+E
Sbjct: 248 GTQSYLVDTADDIDSSWFENITKVAVTAGASAPEVLVQQVVQAIAKLAPSVVTEVEGRKE 307

Query: 301 NMFFEVPKELQ 311
           +  F VP EL+
Sbjct: 308 DTVFAVPAELR 318