Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., hydroxymethylbutenyl pyrophosphate reductase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  109 bits (273), Expect = 7e-29
 Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 15/287 (5%)

Query: 1   MKILLANPRGFCAGVDRAISIVERALELYQPP---------IYVRHEVVHNRFVVEGLKQ 51
           M ++ A   GFC GV  A+  ++R ++  +           I     ++HN  V+E    
Sbjct: 1   MNVIRARTAGFCMGVSLALRKLDREVDRAEEKAAQGSPRCRIATFGPIIHNPQVLEAYAG 60

Query: 52  RGARFVEELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASR 111
            G R + +++EV   + V+  AHGV Q   +  + R   V DATCP V K  + +    R
Sbjct: 61  MGVRCLRQVDEVEAGDHVVIRAHGVPQQQEKALRSRDAVVVDATCPKVKKAQLGIEEQCR 120

Query: 112 KHMEVVLIGHAGHPEVEGTMGQYASDTGGMYLVEKPEDVVSLQAKVKDPSNLHYVSQTTL 171
               ++L G A HPEV G +  YA +   ++       V  L+     P   ++++  T 
Sbjct: 121 AGRTLLLFGEAEHPEVRGLL-SYAGEGALVF-----GSVDELEGLPLQPETEYFLAAQTT 174

Query: 172 SVDETADVIDELRRVFPKIQGPRKDDICYATQNRQDAVRILAEQVDVMVVVGSKNSSNST 231
                 +V           + P  + IC AT+ RQ     +A +VD MVVVG  +S N+ 
Sbjct: 175 QDRVAFEVARAWLHERLGHEVPVLETICDATRLRQQEAIDIARKVDAMVVVGGFDSGNTR 234

Query: 232 RLKELAEKLGTPGYLIDCPQDIDPEWFVDAQLIGVTAGASAPEELVN 278
           RL ++A   G     ++    +  E      +IG+TAGAS P+ +++
Sbjct: 235 RLADVAAAQGVFTVHVENESQLPVEQLRGCGIIGLTAGASTPKSIID 281