Pairwise Alignments

Query, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., penicillin tolerance protein LytB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  116 bits (290), Expect = 7e-31
 Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 18/295 (6%)

Query: 1   MKILLANPRGFCAGVDRAISIVERALELYQPPIYVRHEVVHNRFVVEGLKQRGARFV--E 58
           +K+ +    GFC GV  AI   E  L   +  +Y   ++VHN   VE LK  G   +  +
Sbjct: 2   IKVEIDEGSGFCFGVVTAIHKAEEELAKGET-LYCLGDIVHNSREVERLKAMGLITINRD 60

Query: 59  ELNEVPDDNIVIFSAHGVSQAVRQEAKERSLTVFDATCPLVTKVHMEVARASRKH----M 114
           E  ++ +  +++  AHG      Q A + ++ + DATCP+V ++   + +  RK      
Sbjct: 61  EFRQLRNAKVLL-RAHGEPPETYQIAHKNNIEIIDATCPVVLRLQKRIKQEFRKEDFEEK 119

Query: 115 EVVLIGHAGHPEVEGTMGQYASDTGGMYLV-EKPEDVVSLQAKVKDPSNLHYVSQTTLSV 173
           ++V+ G  GH EV G +GQ    TGG  +V E  E+      K+    ++   SQTT S+
Sbjct: 120 QIVIYGKNGHAEVLGLVGQ----TGGQAIVIESAEEA----KKLDFTKSIRLFSQTTKSL 171

Query: 174 DETADVIDELR-RVFPKIQGPRKDDICYATQNRQDAVRILAEQVDVMVVVGSKNSSNSTR 232
           DE  ++++ ++  + P       D IC    NR   +R  A   D++  V  K SSN   
Sbjct: 172 DEFQEIVEYIKLHISPDATFEYYDTICRQVANRMPNLREFAATHDLIFFVSGKKSSNGKM 231

Query: 233 LKELAEKLGTPGYLIDCPQDIDPEWFVDAQLIGVTAGASAPEELVNQILDRIKEL 287
           L E   K+    +LID  ++IDP    + + IGV    S P+ L+ +I D I+ L
Sbjct: 232 LFEECLKVNANSHLIDNEKEIDPTLLRNVKSIGVCGATSTPKWLMEKIHDHIQLL 286