Pairwise Alignments

Query, 144 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., peptidyl-prolyl cis-trans isomerase, FkbP family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 4e-12
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 5/140 (3%)

Query: 4   IASNSAVTLHFTIKLKDGSVADSTHNQGK-PAKLVMGDGSLSPNFEQCLLGMLPGEKKSV 62
           I  +  V  ++T++ + G V ++  N+G+ P   + G  ++ P  E  + G   GEK +V
Sbjct: 3   IKDDMVVQFNYTLRDEKGEVIET--NEGREPIAYLHGHDNMMPGVENAINGKAVGEKFTV 60

Query: 63  ALAAQDAFGAPNPDHVHYMDRS-KFLGGDLQLEVGTIMAFSGPDGMEIPGIITEIAGDSV 121
            L   + +G            S K L G    + G         G     I+ ++     
Sbjct: 61  TLPCAETYGQRIEGEAAQQRVSVKHLLGASVWKPGMTAVVHTDHGQRQVTIV-KVGKFMA 119

Query: 122 TVDFNHPLAGQDITFDVEIL 141
           TVD NHPLAG+D+TFD+E++
Sbjct: 120 TVDVNHPLAGRDLTFDIEVV 139