Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., Isoleucyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  767 bits (1981), Expect = 0.0
 Identities = 414/953 (43%), Positives = 570/953 (59%), Gaps = 44/953 (4%)

Query: 2   SEYKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYAN 61
           ++YK T+ LP T FPM+  LA++EP +L RW + D+Y  +R+  KG++ FVLHDGPPYAN
Sbjct: 3   ADYKSTVFLPTTDFPMKAGLAEKEPGILARWEKLDIYARLRERSKGREQFVLHDGPPYAN 62

Query: 62  GDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK---VT 118
           G +H GHALNKILKDVI +S+ + G DA Y+PGWDCHGLPIE  +E++    G++   + 
Sbjct: 63  GHLHNGHALNKILKDVITRSQQMLGKDANYVPGWDCHGLPIEWKIEERYRAQGRRKDEID 122

Query: 119 AAEFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHL 178
             EFR +CR++A   +  Q+E FKRLGI G+W +PY TM F  EA I+R LGK    G L
Sbjct: 123 VIEFRRECRQFAEEWIAIQREEFKRLGITGDWKRPYTTMAFAAEAQIVRELGKFLMAGDL 182

Query: 179 LKGFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDV 238
            KG KPV W     +ALA+AEVEY++  S +I +RF       V A  G           
Sbjct: 183 YKGAKPVLWSVVEKTALADAEVEYQDHTSTTIWIRFPVI-RTPVTALEG----------A 231

Query: 239 SIVIWTTTPWTLPANRAVCLRADLEYVLIQV----EGEQP---ERIIVASELAKSVMDRA 291
           S+VIWTTTPWT+P NRAV     ++YV+ +V    EG      ERI V ++L   V+ +A
Sbjct: 232 SVVIWTTTPWTMPGNRAVAYGPGMDYVVFRVTATAEGSLARAGERIAVCADLLDDVLKQA 291

Query: 292 GIEHFHNLGFATGADLELVQFQHPF----YSFTVPAILGDHVTTDSGTGVVHTAPGHGQE 347
            I     +    GADL     +HP+    Y F VP + G  VTT+ GTG VH APGHG++
Sbjct: 292 KITEIEEIAHVKGADLAGTVCRHPWAGKGYDFEVPLLSGLFVTTEQGTGFVHMAPGHGED 351

Query: 348 DFAVGQQYGLEVANPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHS 407
           D+ +    G+   + V  +G+Y+     FAG+HVFK    ++  + + GALL   +  HS
Sbjct: 352 DYFLCLANGIAPPDTVDGDGLYMDHVPGFAGKHVFKVAPDIVAAMIDAGALLAQGSLTHS 411

Query: 408 YPHCWRHKTPIIFRATPQWFVSMEQAGLREQALTAIKGVHWMPDWGQSRIEGMVAGRPEW 467
           YPH WR K P+IFR TPQWF+SME+ GLR++AL AI    W+P  G++RI  M+  RP+W
Sbjct: 412 YPHSWRSKAPLIFRNTPQWFISMEKNGLRDKALAAIDETRWVPPQGRNRIRAMIESRPDW 471

Query: 468 CISRQRTWGVPIALFVHKETAELHPNSADLIEKVAQLVEQKGIQAWWDLDTAELLGAE-D 526
           C+SRQR+WGVPIA+FV K    L    A + E++AQ    +G  AW+  D    LGAE D
Sbjct: 472 CVSRQRSWGVPIAIFVDKRDG-LPLRDAAVTERIAQAFGAEGADAWFTGDPRRFLGAEHD 530

Query: 527 AANYEKVLDTLDVWFDSGVTHSAVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAM 586
             N+E V D ++VWFDSG TH+ V++AR +     AD+YLEGSDQHRGWF +SL+ S   
Sbjct: 531 PENFEPVRDIVEVWFDSGSTHAFVLEARDDLKWP-ADLYLEGSDQHRGWFHTSLLESCGT 589

Query: 587 KGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAV 646
           +G+APY  VLTHGF++D +G K+SKS GN  +PQ V + +GADI+RLWV S+DYTG++  
Sbjct: 590 RGRAPYDAVLTHGFLLDEKGDKLSKSKGNAESPQKVVSSVGADIMRLWVVSSDYTGDIRF 649

Query: 647 SDEILKRSADAYRRIRNTARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEII 706
             EILK++ D YRR+RNT RF L  L GF+    I  +  M  L+RW + R      ++ 
Sbjct: 650 GPEILKQTTDTYRRLRNTLRFLLGALAGFDKAERIDDIAAMPELERWVLHRLSEIDVKVR 709

Query: 707 QAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALV 766
                ++ H + Q L  FC++++ +FYLD+ KD  Y    G   +R+C+T +  + + LV
Sbjct: 710 GCCDAFSFHEMFQELHGFCAVDLSAFYLDIRKDALYCDGAGSLRRRACRTVIDTVFDCLV 769

Query: 767 RWMAPIMSFTADEIWNAMPAQQADGSARDKF-VFTTEWFDGLFGLAEGEELNNAFWNDIQ 825
           +W+AP + FTA+E W      + D      F     +W D    LAE        W  ++
Sbjct: 770 KWLAPFVCFTAEEAWLTRFPSEDDSVHFQSFPTVPGDWRDD--ALAER-------WTKVR 820

Query: 826 KVRGSVNKLLENARNEKLIGGSLQAELVLFADDSLASKLAKLGDELRFVLLTSKAVVKPL 885
           ++R  +   LE AR  K IG SLQA  V+ A   L +  A  G ++  + +TS   +   
Sbjct: 821 RLRRVITGALEVARANKTIGASLQAAPVVHAPAELLNACA--GLDMAEISITSDITLTDS 878

Query: 886 AEK--SEAAQATD-IDGLFVQVNKTEAEKCDRCWHHTPDVGTIAGHTTICGRC 935
           A++   E A   D + G+ V V   E EKC RCW   PDVGT A H  +CGRC
Sbjct: 879 ADQPIPEGAYTLDEVAGVGVVVALAEGEKCQRCWEILPDVGTHA-HEGLCGRC 930