Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 1354 bits (3505), Expect = 0.0
 Identities = 641/950 (67%), Positives = 770/950 (81%), Gaps = 11/950 (1%)

Query: 1   MSEYKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYA 60
           MS+YK TLNLPET FPMRG+LA+REPEML+ W ++ LY  IR+++ G K F+LHDGPPYA
Sbjct: 1   MSDYKSTLNLPETEFPMRGNLAQREPEMLKSWTEKKLYQKIRESRTGAKPFILHDGPPYA 60

Query: 61  NGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAA 120
           NG IHIGH++NKILKD+IIKSKTLSGFDAPYIPGWDCHGLPIEL VE+KVGKPGQKV+AA
Sbjct: 61  NGSIHIGHSVNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGQKVSAA 120

Query: 121 EFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLK 180
           EFR+KCREYAA QV+GQ+E F RLG+LG+W  PY TM+F TEANI+R+L K+ DNGHL K
Sbjct: 121 EFRQKCREYAAAQVDGQREDFIRLGVLGDWQNPYLTMNFDTEANIVRSLAKVIDNGHLHK 180

Query: 181 GFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSI 240
           G KPVHWCTDCGSALAEAEVEY++K SP+IDV F A D+AAVLAKFGL    +   +V+ 
Sbjct: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAVDQAAVLAKFGL---EQSDAEVAT 237

Query: 241 VIWTTTPWTLPANRAVCLRADLEYVLIQVEGEQPER-IIVASELAKSVMDRAGIEHFHNL 299
           VIWTTTPWTLPANR + +  D++Y L++   +  +R IIVA EL +S ++R G E    L
Sbjct: 238 VIWTTTPWTLPANRGLSMAGDIDYDLVEFTKDGSKRAIIVAQELVESCIERYGAELHSVL 297

Query: 300 GFATGADLELVQFQHPFYSFTVPAILGDHVTTDSGTGVVHTAPGHGQEDFAVGQQYGLEV 359
           G   G  LEL++F+HPFY F VP I+GDHVT DSGTGVVHTAPGHGQ+DF +GQ+YGLEV
Sbjct: 298 GTVKGQALELLRFKHPFYDFDVPVIIGDHVTVDSGTGVVHTAPGHGQDDFVIGQKYGLEV 357

Query: 360 ANPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPII 419
           ANPVG NGVY PDTE FAGQHVFKAND+V+ +L+EKGALL+H AY HSYPHCWRHKTPII
Sbjct: 358 ANPVGDNGVYKPDTEFFAGQHVFKANDNVVALLEEKGALLNHVAYRHSYPHCWRHKTPII 417

Query: 420 FRATPQWFVSMEQAGLREQALTAIKGVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPI 479
           FRATPQWF+SM+Q GLR Q+L+ I+   W+PDWGQSRIE MV  RP+WCISRQRTWGVPI
Sbjct: 418 FRATPQWFISMDQKGLRTQSLSEIEKTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPI 477

Query: 480 ALFVHKETAELHPNSADLIEKVAQLVEQKGIQAWWDLDTAELLGAEDAANYEKVLDTLDV 539
            LFVH++T ELHP+S  L+E+VA  +EQ+GIQAWWDLD AELLG E+A  Y KV DTLDV
Sbjct: 478 TLFVHRDTEELHPDSVALMERVAHRIEQEGIQAWWDLDAAELLG-EEADQYRKVTDTLDV 536

Query: 540 WFDSGVTHSAVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHG 599
           W+DSG T S+VV AR E+NG   D+YLEGSDQHRGWF SSL+ S AM GKAPYK+VLTHG
Sbjct: 537 WYDSGSTFSSVVAARPEYNGHPVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHG 596

Query: 600 FVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 659
           F VDGQGRKMSKSIGNV+AP  VTNKLGADILRLWVA+TDY+GE+ VSDEILKRSADAYR
Sbjct: 597 FTVDGQGRKMSKSIGNVIAPLQVTNKLGADILRLWVAATDYSGEMTVSDEILKRSADAYR 656

Query: 660 RIRNTARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQ 719
           RIRNTARF LANLNGF+P  D + +EDMVALDRW V RA A Q EI++AY+ YN H V Q
Sbjct: 657 RIRNTARFLLANLNGFDPVNDTVAIEDMVALDRWVVRRAAALQAEILEAYEQYNFHLVTQ 716

Query: 720 RLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADE 779
           +LM FCS+E+GSFYLD+IKDRQYTAKR   A+RSCQ+ALF I EA+VRW+API+SFTADE
Sbjct: 717 KLMQFCSVELGSFYLDIIKDRQYTAKRDSLARRSCQSALFLIAEAMVRWIAPILSFTADE 776

Query: 780 IWNAMPAQQADGSARDKFVFTTEWFDGLFGLAEGEELNNAFWNDIQKVRGSVNKLLENAR 839
           +W ++P +      R++FVFT  WF+GL  +    +L++ +W ++  VR  VNK +E AR
Sbjct: 777 VWQSLPGE------REEFVFTQTWFEGLVSVTLDSDLSDDYWANLITVRDEVNKAIEQAR 830

Query: 840 NEKLIGGSLQAELVLFADDSLASKLAKLGDELRFVLLTSKAVVKPLAEKSEAAQATDIDG 899
            E+ +GGSL+AE+ ++AD++L   LA LGDELRFVLLTS   + PLA   + A  T++ G
Sbjct: 831 REQRVGGSLEAEVTIYADEALTESLALLGDELRFVLLTSNTQIAPLANAGDDAVETELAG 890

Query: 900 LFVQVNKTEAEKCDRCWHHTPDVGTIAGHTTICGRCVSNVEGEGEVRKFA 949
           L + V+KTEA KCDRCWHH  DVG +  H  +C RCV+N+EG+GEVR+FA
Sbjct: 891 LKLLVDKTEAAKCDRCWHHREDVGQVEAHPLLCTRCVTNIEGDGEVRQFA 940