Pairwise Alignments
Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056
Subject, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis JJ
Score = 391 bits (1004), Expect = e-112
Identities = 257/859 (29%), Positives = 421/859 (49%), Gaps = 91/859 (10%)
Query: 25 EPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTL 84
+ ++ + W +E+ Y ++ + + DGPPY +G IH+G A NKI+KD +++ K +
Sbjct: 13 DKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRI 72
Query: 85 SGFDAPYIPGWDCHGLPIELMVEKKVGKPGQ-----KVTAAEFREKCREYAAGQVEGQKE 139
G++ GWD HGLPIE+ VE + + K+ EF KC+E+A + +
Sbjct: 73 QGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFALNHLGHMQG 132
Query: 140 SFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLKGFKPVHWCTDCGSALAEAE 199
F+ LG+ +++ Y + L K + L K + +WC C ++LAE E
Sbjct: 133 QFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHE 192
Query: 200 V--EYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSIVIWTTTPWTLPANRAVC 257
V EYK + PS+ V+FK K D I IWTTTPWTLP+N VC
Sbjct: 193 VRGEYKEVLDPSVYVKFKLE-----------------KSDEYITIWTTTPWTLPSNMLVC 235
Query: 258 LRADLEYVLIQVEGEQ--PERIIVASELAKSVMDRA----GIEHFHNLGFATGADLELVQ 311
+ + +Y + VE E E I+A +L VM +A I F G L ++
Sbjct: 236 VNPEFDYAYVSVEFENGTVETWIIAEKLVNDVMKKAEKNNEISKFSISKVVKGDSLIGLK 295
Query: 312 FQHPFYSFTV------------PAILGDHVTTDSGTGVVHTAPGHGQEDFAVGQQYGLEV 359
+ HP + GDHVT + GTG+VHTAPG G++DF +G+++ + V
Sbjct: 296 YIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIPV 355
Query: 360 ANPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPII 419
P+ NG Y ++ G V ++SV+E L K L++ +H+YPHCWR KTP++
Sbjct: 356 YAPIDDNGKY--TDSIWKGTFVKDMDESVIETLLSKNLLVNSGKVKHTYPHCWRCKTPLL 413
Query: 420 FRATPQWFVSMEQAGLREQALTAIKGVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPI 479
FRAT QWF+S+ + +++ + K V W+PDW ++R V+ +W ISRQR WG+P+
Sbjct: 414 FRATEQWFLSISK--IKDSIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGIPL 471
Query: 480 ALFVHKETAELHPNSADLIEKVAQLVEQKGIQAWWDLDTAEL---------LGAEDAANY 530
+++ +E + ++I V +L E+ + D+D +++ L
Sbjct: 472 PIWICEECGKY-----EVIGSVGELKERANEK---DVDLSDIHKPAVDKITLTCSCGGKM 523
Query: 531 EKVLDTLDVWFDSGVTHSAVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKA 590
++ D LDVW+DSG+ A + +++ +A EG+DQ WF S S +
Sbjct: 524 KRTPDVLDVWYDSGLAPYASIGSKKL---KKAQFITEGNDQVTKWFYSQHALSAVVFDDT 580
Query: 591 PYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEI 650
Y++ + HGF +D G KMSKS+GN+V+P DVT++ GAD+LR ++ S + E
Sbjct: 581 SYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTDQYGADVLRFYLLSANKAWE---DLRF 637
Query: 651 LKRSADAYRRIRNT---ARFFLAN---LNGFNPTTDIIP-VEDMVALDRWAVGRALAAQQ 703
D R + NT + F AN L+ F P + V+D D W + R +
Sbjct: 638 SYSEMDETRSMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDE---DAWILSRINTVAK 694
Query: 704 EIIQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVE 763
E ++A + +LH L +F + +Y+ +I+DR + K + QT L++++
Sbjct: 695 EAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQT-LYYVIM 753
Query: 764 ALVRWMAPIMSFTADEIWNAMPAQQADGSARDKFVFTTEWFDGLFGLAEGEELNNAFWND 823
L+ MAP+ ++EI+ + + S +F + E E +N D
Sbjct: 754 KLISIMAPVTPHLSEEIYQNLKTEDMPES-----IFMNKL------TIESEFINETLEKD 802
Query: 824 IQKVRGSVNKLLENARNEK 842
+ +R V+ +L+ K
Sbjct: 803 TEIIREIVDSILKGRDKAK 821
Score = 28.1 bits (61), Expect = 0.003
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 19 GDLAKREPEMLQRWYQEDL--YGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKD 76
G KR P++L WY L Y +I +KK KK+ + +G + HAL+ ++ D
Sbjct: 520 GGKMKRTPDVLDVWYDSGLAPYASI-GSKKLKKAQFITEGNDQVTKWFYSQHALSAVVFD 578
Score = 26.6 bits (57), Expect = 0.009
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 814 EELNNAFWNDIQKVRGSVNKLLENARNEKLIGGSLQ 849
+EL F +D+ KV ++N + + EKL G+L+
Sbjct: 873 KELGKIFRSDVPKVVAAINSVAPSELKEKLKSGNLK 908