Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1350 bits (3495), Expect = 0.0
 Identities = 641/950 (67%), Positives = 770/950 (81%), Gaps = 11/950 (1%)

Query: 1   MSEYKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYA 60
           MS+YK TLNLPET FPMRG+LA REPEML+RW ++ LY  IR ++ G+  F+LHDGPPYA
Sbjct: 1   MSDYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYA 60

Query: 61  NGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAA 120
           NG IHIGH++NKILKD+I+KSKT+SGFDAPY+PGWDCHGLPIEL VE+KVGKPGQK++AA
Sbjct: 61  NGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA 120

Query: 121 EFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLK 180
           EFRE+CR+YAA QV+GQ+E F RLG+LG+W  PY TMDF TEANI+R+L K+ +NGHL K
Sbjct: 121 EFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHK 180

Query: 181 GFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSI 240
           G KPVHWCTDCGSALAEAEVEY++K SP+IDV F A D  AV  KFG++   +    VS+
Sbjct: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVS---DYSHSVSM 237

Query: 241 VIWTTTPWTLPANRAVCLRADLEYVLIQ-VEGEQPERIIVASELAKSVMDRAGIEHFHNL 299
           VIWTTTPWTLPANRA+ +  +L+Y L++ V+      +I+A  L ++ M R G E    L
Sbjct: 238 VIWTTTPWTLPANRALSISPELDYSLVEFVKDGVTHAVILADVLVEACMTRYGAESHSVL 297

Query: 300 GFATGADLELVQFQHPFYSFTVPAILGDHVTTDSGTGVVHTAPGHGQEDFAVGQQYGLEV 359
               GA LELV+F+HPF +F VPAILGDHVTTD+GTGVVHTAPGHGQ+DF VGQ+YGLEV
Sbjct: 298 AKIKGAALELVRFKHPFLAFDVPAILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEV 357

Query: 360 ANPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPII 419
           ANPVG NGVY PDTE FAGQHVFKAND+V+ +LKEKGALLHH AY HSYPHCWRHKTPII
Sbjct: 358 ANPVGDNGVYKPDTEFFAGQHVFKANDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPII 417

Query: 420 FRATPQWFVSMEQAGLREQALTAIKGVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPI 479
           FRATPQWF+SM+   LR+QAL+ I+ + W+PDWGQSRIE MV  RP+WCISRQRTWGVPI
Sbjct: 418 FRATPQWFISMDNHNLRKQALSEIEQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPI 477

Query: 480 ALFVHKETAELHPNSADLIEKVAQLVEQKGIQAWWDLDTAELLGAEDAANYEKVLDTLDV 539
            LFVH+ET ELHP+S  L+ +VA  +EQ+GIQAWWDLD AELLG E+A  Y KV DTLDV
Sbjct: 478 TLFVHRETEELHPDSVSLMARVANRIEQEGIQAWWDLDAAELLG-EEAEQYRKVTDTLDV 536

Query: 540 WFDSGVTHSAVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAPYKEVLTHG 599
           W+DSG T ++VV AR EF+G   D+YLEGSDQHRGWF SSL+ S AM GKAPYK+VLTHG
Sbjct: 537 WYDSGSTFASVVAARPEFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHG 596

Query: 600 FVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 659
           F VDG+GRKMSKSIGNV+APQ VTNKLGADILRLWVA+TDY+GE+ VSDEIL RSADAYR
Sbjct: 597 FTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYR 656

Query: 660 RIRNTARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQ 719
           RIRNTARF LANLNGF+P  D++ VEDMVALDRWAV RA A QQEII+AY+ YN H V Q
Sbjct: 657 RIRNTARFLLANLNGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQ 716

Query: 720 RLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADE 779
           +LM FCSIE+GSFYLD+IKDRQYTAK+ GHA+RSCQ+ALF I EA+VRW+AP++SFTADE
Sbjct: 717 KLMQFCSIELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADE 776

Query: 780 IWNAMPAQQADGSARDKFVFTTEWFDGLFGLAEGEELNNAFWNDIQKVRGSVNKLLENAR 839
           +W  +P Q      RD +VFT EW+ GL  +    +L++A+W ++  VR  VNK++E AR
Sbjct: 777 VWQLLPGQ------RDAYVFTQEWYQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQAR 830

Query: 840 NEKLIGGSLQAELVLFADDSLASKLAKLGDELRFVLLTSKAVVKPLAEKSEAAQATDIDG 899
            +K +GGSL+AE+ LFAD +L  +L  +GDELRFVLLTS+A V PL + +  A  T++  
Sbjct: 831 RDKRVGGSLEAEVTLFADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDAVETELAS 890

Query: 900 LFVQVNKTEAEKCDRCWHHTPDVGTIAGHTTICGRCVSNVEGEGEVRKFA 949
           L + VN T AEKC+RCWHH  +VGTI  H T+C RCV+N+EG+GEVR FA
Sbjct: 891 LKLVVNATTAEKCERCWHHREEVGTIEAHPTLCHRCVTNIEGDGEVRLFA 940