Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 958 a.a., valyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (374), Expect = 1e-39
 Identities = 182/839 (21%), Positives = 326/839 (38%), Gaps = 164/839 (19%)

Query: 25  EPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTL 84
           E  + Q W ++  +     A +G    ++   PP   G +H+GHA    + D +I+ + +
Sbjct: 11  EQTLYQNWEEKGYFKPHGDASQGNYCIMIP--PPNVTGSLHMGHAFQDTIMDTLIRYQRM 68

Query: 85  SGFDAPYIPGWDCHGLPIELMVEKKV----GKPGQKVTAAEFREKCREYAAGQVEGQKES 140
            G +  +  G D  G+  +++VE+K+    GK    +    F EK  E+ A       + 
Sbjct: 69  KGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFMEKVWEWKAQSGGTITKQ 128

Query: 141 FKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLKGFKPVHWCTDCGSALAEAEV 200
            +R+G   +WD+   TMD      +     ++ ++  + +G + V+W     +A+++ EV
Sbjct: 129 LRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEV 188

Query: 201 EYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSIVIWTTTPWTLPANRAVCLRA 260
           E K K      +R+  AD              +GK  + +   TT P T+  + AV +  
Sbjct: 189 ENKEKQGHMWHLRYPLADGELTA---------DGKDYLEVA--TTRPETMLGDSAVAVHP 237

Query: 261 DLEYVLIQVEGEQPERIIVASELAKSVMDRAGIEHFHNLGFATGADLELVQFQHPFYSFT 320
           D          ++  + ++   +   +++R                              
Sbjct: 238 D----------DERYQALIGKYILLPIVNR-----------------------------R 258

Query: 321 VPAILGDHVTTDSGTGVVHTAPGHGQEDFAVGQQYGL----------------EVANPVG 364
           +P +  D+V    GTG V   P H   D+ VG+++ L                EV N  G
Sbjct: 259 IPIVADDYVDMAFGTGCVKITPAHDFNDYEVGKRHKLPMFNVLTLDAAIRSSAEVVNTDG 318

Query: 365 SNGVYLPDT--ELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPIIFRA 422
           +    L  +  E +AG   FKA D+++   +  G L     +    P+  R    I    
Sbjct: 319 TINTSLDGSLPERYAGLDRFKARDAIVAEFETLGLLEKIAPHGLKVPYGDRSGVVIEPML 378

Query: 423 TPQWFVSMEQAGLREQALTAIKG--VHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPIA 480
           T QW+V++  A + + A+ A++   + ++P   ++     +    +WCISRQ  WG    
Sbjct: 379 TDQWYVAV--APMAKTAIEAVENGDIKFVPQQYENMYFSWMRDIQDWCISRQLWWG---- 432

Query: 481 LFVHKETAELHPNSADLIEKVAQLVEQKGIQAWWDLDTAELLGAEDAANYEKVLDTLDVW 540
              H+  A    N    + +      +  ++A  D+D A  L  ++        D LD W
Sbjct: 433 ---HRIPAWYDTNGKVYVGRT-----EAEVRAKHDIDDAIALRQDE--------DVLDTW 476

Query: 541 FDSGV-THSAV-----VDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAM------KG 588
           F S + T S +     V+  + F+    D+ + G D    W    ++ ++        K 
Sbjct: 477 FSSALWTFSTLGWPDNVEDLKTFH--PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKP 534

Query: 589 KAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKL---------------------- 626
           + P+K V   G + D  G KMSKS GNV+ P D+ + +                      
Sbjct: 535 QVPFKTVYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKI 594

Query: 627 ---------------GADILRLWVASTDYTGEVAVSDEILKRSADAYR----RIRNTARF 667
                          G D LR  +A+   TG     D  +KR  D YR    ++ N +R+
Sbjct: 595 EKSTRKEFENGIEAHGTDALRFTLAAMASTGRDINWD--MKR-LDGYRSFCNKLWNASRY 651

Query: 668 FLANLNGFNPTTDIIPVE----DMVALDRWAVGRALAAQQEIIQAYQDYNLHAVVQRLMN 723
            L N  G +   +    +    ++   DRW +       +   +    Y        L  
Sbjct: 652 VLMNTEGQDCGPNSPDYQGGEMELSLADRWIIDLFNQTVKTYDEHMASYRFDLAANTLYE 711

Query: 724 FCSIEMGSFYLDVIKDRQYTAKRGGHAQ-RSCQTALFFIVEALVRWMAPIMSFTADEIW 781
           F   +   +YL++ K      + G  AQ R  +  L  ++EA+ R M P+M +  + IW
Sbjct: 712 FTWNQFCDWYLELTKP---VLQNGTEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIW 767