Pairwise Alignments

Query, 949 a.a., isoleucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 938 a.a., isoleucyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  852 bits (2200), Expect = 0.0
 Identities = 442/960 (46%), Positives = 605/960 (63%), Gaps = 40/960 (4%)

Query: 1   MSEYKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYA 60
           MS+YK TL LPET FPM+ +L +REPEML++W ++D YGA+ +A   + ++VLHDGPPYA
Sbjct: 1   MSDYKKTLQLPETKFPMKANLTQREPEMLRKWEKDDAYGAMVRASGQQGTYVLHDGPPYA 60

Query: 61  NGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAA 120
           NG+IH+GHALNKILKD+I+KS+ L GF A Y+PGWDCHGLPIEL VE ++G+  + + A 
Sbjct: 61  NGNIHMGHALNKILKDIIVKSRNLQGFKAEYVPGWDCHGLPIELKVEHELGEKKRTMPAH 120

Query: 121 EFREKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFVTEANIIRALGKIADNGHLLK 180
             R++CR+YA   ++ Q++ FKRLG+ G WDKPY TM    EA   R LG  A  G L++
Sbjct: 121 AVRKRCRQYAEKYLDIQRKEFKRLGVFGAWDKPYVTMHPSYEAATARELGNFAAKGGLVR 180

Query: 181 GFKPVHWCTDCGSALAEAEVEYKNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSI 240
             KP++WC  C +ALAEAEVEY +  SPS+ VRF   D        G+   H       I
Sbjct: 181 SKKPIYWCCSCQTALAEAEVEYHDHTSPSVHVRFPLRDPRVAEVLPGVDPAH-----AYI 235

Query: 241 VIWTTTPWTLPANRAVCLRADLEYVLIQVEGEQPERIIVASELAKSVMDRAGIEHFHNLG 300
           VIWTTTPWTLP N AV +  D +YV+++  G+     IVA  L ++ +     +    + 
Sbjct: 236 VIWTTTPWTLPDNMAVAVHPDFDYVVVRHGGDFH---IVAEGLLEACLKAFKWDEHEVVA 292

Query: 301 FATGADLELVQFQHPFYSFTVPAILGDHVTTDSGTGVVHTAPGHGQEDFAVGQQYGLEVA 360
              G  LE ++  HPFY    P +L D+VT +SGTG VHTAPGHG+ED+  G +YGL++ 
Sbjct: 293 RIGGRALEGLKATHPFYDRPSPIVLADYVTLESGTGCVHTAPGHGREDYETGLRYGLDIY 352

Query: 361 NPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPIIF 420
           +P+   G YL   E FAG  +F+AN  V+E L+E G LL      HSYPHCWR K P+IF
Sbjct: 353 SPLTDEGRYLDCVEFFAGMTIFEANPKVIEKLREVGNLLAEGRITHSYPHCWRCKKPVIF 412

Query: 421 RATPQWFVSMEQAGLREQALTAIK-GVHWMPDWGQSRIEGMVAGRPEWCISRQRTWGVPI 479
           RAT QWF++ME+  LR++AL AI+  V W+P WGQ RI  M+  RP+WCISRQR WGVPI
Sbjct: 413 RATTQWFIAMERNDLRQKALDAIRDDVRWIPSWGQERIHNMIEFRPDWCISRQRMWGVPI 472

Query: 480 ALFVHKETAELHPNSADLIEKVAQLVEQ--KGIQAWWDLDTAELLGAE------DAANYE 531
              + ++  E   N AD +  +A+   +   G   W++ D ++++ A          +++
Sbjct: 473 VALLCEDCGEAW-NDADWMRDIAERFAKHATGCDYWYETDLSDIVPAGLRCPKCGGDHWK 531

Query: 532 KVLDTLDVWFDSGVTHSAVVDARQEFNGAEADMYLEGSDQHRGWFQSSLISSVAMKGKAP 591
           K  D LDVWFDSG + +AVV+ R+E  G  AD+YLEGSDQHRGWF SSL++S+  +G  P
Sbjct: 532 KETDILDVWFDSGTSFAAVVEQREEC-GFPADLYLEGSDQHRGWFHSSLLASIGTRGVPP 590

Query: 592 YKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDEIL 651
           Y+ VLTHG+VVDG GRKMSKS+GNVVAPQ++ +K GA++LRLWVAS DY  ++ +S+EIL
Sbjct: 591 YRSVLTHGYVVDGDGRKMSKSVGNVVAPQEIIDKHGAEVLRLWVASVDYREDIRISEEIL 650

Query: 652 KRSADAYRRIRNTARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEIIQAYQD 711
            R  DAYRRIRNT R+ L N++   P T ++P E M  LDR+A+  A  A + I  AY +
Sbjct: 651 NRLVDAYRRIRNTCRYLLGNISDLTPET-MVPFEAMDPLDRFALDLASRAHERIQDAYTE 709

Query: 712 YNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAP 771
           Y  H V   L N C  ++ +FYLD++KDR Y++    HA+RS QTAL+ I+  +VR MAP
Sbjct: 710 YEFHKVFHTLHNLCVTDLSAFYLDILKDRLYSSAADSHARRSAQTALYRILMLMVRDMAP 769

Query: 772 IMSFTADEIWNAMPAQQADG-------SARDKFVFTTEWFDGLFGLAEGEELNNAFWNDI 824
           ++SFTA+E++  +PA             A D   FT             +  + A W  +
Sbjct: 770 VLSFTAEEVFGYVPAALRPDVISVFALPATDAPAFTL------------DTTSRAAWEKL 817

Query: 825 QKVRGSVNKLLENARNEKLIGGSLQAELVLFADDSLASKLAKLGDELRFVLLTSKAVVKP 884
             VR    K +E  R    +G SL   + LFAD SL + L  LG +LR + + S+  V  
Sbjct: 818 LAVRSETTKAIEPLRKSGEVGHSLDTHVTLFADPSLKATLEGLGSDLRAMFIVSRLEVMD 877

Query: 885 LAE-KSEAAQATDIDGLFVQVNKTEAEKCDRCWHHTPDVGTIAGHTTICGRCVSNVEGEG 943
           LA+  ++A  + ++  L V V K E EKC+RCW  + D+GT A H T+C RC + + G G
Sbjct: 878 LADAPADAWTSEELPELKVTVRKAEGEKCERCWIISADLGTDAAHPTLCPRCTAVLTGTG 937